Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ZK970.8 | act-5 | ZK970.8.1 | T25C8.2.2 | Uncharacterized protein. | ACTin. | 0.912 |
| ZK970.8 | arl-8 | ZK970.8.1 | Y57G11C.13.1 | Uncharacterized protein. | Novel small G protein indispensable for equal chromosome segregation; Belongs to the small GTPase superfamily. Arf family. | 0.704 |
| ZK970.8 | rab-3 | ZK970.8.1 | C18A3.6a.1 | Uncharacterized protein. | Ras-related protein Rab-3; Involved in exocytosis by regulating a late step in synaptic vesicle fusion. Could play a role in neurotransmitter release by regulating membrane flow in the nerve terminal (By similarity). Plays a role in the recruitment of endophilin unc-57 to synaptic vesicles. Probably by controlling dense-core vesicle trafficking, plays a role in the AVG neuron-mediated formation of the right axon tract of the ventral nerve cord. Belongs to the small GTPase superfamily. Rab family. | 0.701 |
| ZK970.8 | rab-5 | ZK970.8.1 | F26H9.6.1 | Uncharacterized protein. | RAB family. | 0.849 |
| act-5 | ZK970.8 | T25C8.2.2 | ZK970.8.1 | ACTin. | Uncharacterized protein. | 0.912 |
| act-5 | arl-8 | T25C8.2.2 | Y57G11C.13.1 | ACTin. | Novel small G protein indispensable for equal chromosome segregation; Belongs to the small GTPase superfamily. Arf family. | 0.484 |
| act-5 | cdk-5 | T25C8.2.2 | T27E9.3.1 | ACTin. | Cyclin-dependent-like kinase 5; Proline-directed serine/threonine-protein kinase which, in several motor neurons, promotes the polarized trafficking of synaptic vesicles and dense-core vesicles (DCV). In the ventral nerve cord, phosphorylates lin-10 and thereby prevents lin-10-mediated anterograde trafficking of the glutamate receptor glr-1. Involved in the inhibition of glr-1 trafficking in hypoxic conditions. In DA motor neurons but not in DB motor neurons, regulates axonal transport of synaptic vesicle precursors by inhibiting dynein-mediated retrograde transport. Regulates the traf [...] | 0.820 |
| act-5 | jnk-1 | T25C8.2.2 | B0478.1a.1 | ACTin. | Stress-activated protein kinase jnk-1; Serine/threonine-protein kinase which responds to activation by environmental stress by phosphorylating a number of transcription factors such as daf-16, and thus regulates transcriptional activity. By phosphorylating daf-16, plays a role in daf-16 nuclear translocation in intestinal cells in response to environmental stresses such as heat and oxidative stresses. Downstream of jkk-1, may coordinate locomotion via type-D GABAergic motoneurons and regulates synaptic vesicle transport in conjunction with unc-16. Independently of jkk-1, may regulate s [...] | 0.486 |
| act-5 | rab-3 | T25C8.2.2 | C18A3.6a.1 | ACTin. | Ras-related protein Rab-3; Involved in exocytosis by regulating a late step in synaptic vesicle fusion. Could play a role in neurotransmitter release by regulating membrane flow in the nerve terminal (By similarity). Plays a role in the recruitment of endophilin unc-57 to synaptic vesicles. Probably by controlling dense-core vesicle trafficking, plays a role in the AVG neuron-mediated formation of the right axon tract of the ventral nerve cord. Belongs to the small GTPase superfamily. Rab family. | 0.645 |
| act-5 | rab-5 | T25C8.2.2 | F26H9.6.1 | ACTin. | RAB family. | 0.904 |
| act-5 | snt-3 | T25C8.2.2 | Y75B7AL.3.1 | ACTin. | SyNapTotagmin. | 0.700 |
| act-5 | snt-4 | T25C8.2.2 | T23H2.2.1 | ACTin. | SyNapTotagmin. | 0.715 |
| act-5 | snt-5 | T25C8.2.2 | R12A1.2a.1 | ACTin. | SyNapTotagmin. | 0.700 |
| act-5 | snt-6 | T25C8.2.2 | C08G5.4a.1 | ACTin. | C2 domain-containing protein. | 0.741 |
| act-5 | snt-7 | T25C8.2.2 | T10B10.5.1 | ACTin. | C2 domain-containing protein. | 0.699 |
| arl-8 | ZK970.8 | Y57G11C.13.1 | ZK970.8.1 | Novel small G protein indispensable for equal chromosome segregation; Belongs to the small GTPase superfamily. Arf family. | Uncharacterized protein. | 0.704 |
| arl-8 | act-5 | Y57G11C.13.1 | T25C8.2.2 | Novel small G protein indispensable for equal chromosome segregation; Belongs to the small GTPase superfamily. Arf family. | ACTin. | 0.484 |
| arl-8 | cdk-5 | Y57G11C.13.1 | T27E9.3.1 | Novel small G protein indispensable for equal chromosome segregation; Belongs to the small GTPase superfamily. Arf family. | Cyclin-dependent-like kinase 5; Proline-directed serine/threonine-protein kinase which, in several motor neurons, promotes the polarized trafficking of synaptic vesicles and dense-core vesicles (DCV). In the ventral nerve cord, phosphorylates lin-10 and thereby prevents lin-10-mediated anterograde trafficking of the glutamate receptor glr-1. Involved in the inhibition of glr-1 trafficking in hypoxic conditions. In DA motor neurons but not in DB motor neurons, regulates axonal transport of synaptic vesicle precursors by inhibiting dynein-mediated retrograde transport. Regulates the traf [...] | 0.483 |
| arl-8 | jip-1 | Y57G11C.13.1 | F56D12.4a.1 | Novel small G protein indispensable for equal chromosome segregation; Belongs to the small GTPase superfamily. Arf family. | PID domain-containing protein. | 0.424 |
| arl-8 | jkk-1 | Y57G11C.13.1 | F35C8.3.1 | Novel small G protein indispensable for equal chromosome segregation; Belongs to the small GTPase superfamily. Arf family. | Dual specificity mitogen-activated protein kinase kinase jkk-1; Dual specificity protein kinase which acts as an essential component of the JNK signal transduction pathway. May phosphorylate jnk-1. Plays a role in coordinating locomotion via D-type GABAergic motoneurons and in regulating synaptic vesicle transport downstream of adapter protein unc-16 and probably by activating jnk-1. Positively regulates lifespan. Upon environmental stress such as heat stress regulates daf-16 nuclear translocation probably by activating jnk-1. Regulates germline cell apoptosis in response to heavy meta [...] | 0.690 |
page 1 of 5