Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cyk-3 | otub-1 | ZK328.1b.1 | C25D7.8.2 | Ubiquitin carboxyl-terminal hydrolase cyk-3; Ubiquitin-protein hydrolase which cleaves ubiquitin from ubiquitinated proteins. Plays a role in embryo osmoregulation. Probably by regulating osmosis, controls actin redistribution in the 1-cell embryos and thus actin-dependent processes such as cytokinesis and P-granules segregation. During the first embryonic mitotic division, involved in the formation of a functional microtubule organizing center provided by the male pronucleus ; Belongs to the peptidase C19 family. | Ubiquitin thioesterase otubain-like; Hydrolase that can remove conjugated ubiquitin from proteins and plays an important regulatory role at the level of protein turnover by preventing degradation. Specifically cleaves 'Lys-48'-linked polyubiquitin. | 0.409 |
| cyk-3 | usp-5 | ZK328.1b.1 | T27A3.2.1 | Ubiquitin carboxyl-terminal hydrolase cyk-3; Ubiquitin-protein hydrolase which cleaves ubiquitin from ubiquitinated proteins. Plays a role in embryo osmoregulation. Probably by regulating osmosis, controls actin redistribution in the 1-cell embryos and thus actin-dependent processes such as cytokinesis and P-granules segregation. During the first embryonic mitotic division, involved in the formation of a functional microtubule organizing center provided by the male pronucleus ; Belongs to the peptidase C19 family. | Ubiquitin carboxyl-terminal hydrolase. | 0.831 |
| eif-3.H | usp-5 | C41D11.2.1 | T27A3.2.1 | Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | Ubiquitin carboxyl-terminal hydrolase. | 0.414 |
| josd-1 | otub-1 | Y71H2AR.3.1 | C25D7.8.2 | Josephin domain-containing protein. | Ubiquitin thioesterase otubain-like; Hydrolase that can remove conjugated ubiquitin from proteins and plays an important regulatory role at the level of protein turnover by preventing degradation. Specifically cleaves 'Lys-48'-linked polyubiquitin. | 0.708 |
| josd-1 | usp-33 | Y71H2AR.3.1 | K09A9.4.1 | Josephin domain-containing protein. | Ubiquitin carboxyl-terminal hydrolase. | 0.401 |
| josd-1 | usp-5 | Y71H2AR.3.1 | T27A3.2.1 | Josephin domain-containing protein. | Ubiquitin carboxyl-terminal hydrolase. | 0.584 |
| otub-1 | cyk-3 | C25D7.8.2 | ZK328.1b.1 | Ubiquitin thioesterase otubain-like; Hydrolase that can remove conjugated ubiquitin from proteins and plays an important regulatory role at the level of protein turnover by preventing degradation. Specifically cleaves 'Lys-48'-linked polyubiquitin. | Ubiquitin carboxyl-terminal hydrolase cyk-3; Ubiquitin-protein hydrolase which cleaves ubiquitin from ubiquitinated proteins. Plays a role in embryo osmoregulation. Probably by regulating osmosis, controls actin redistribution in the 1-cell embryos and thus actin-dependent processes such as cytokinesis and P-granules segregation. During the first embryonic mitotic division, involved in the formation of a functional microtubule organizing center provided by the male pronucleus ; Belongs to the peptidase C19 family. | 0.409 |
| otub-1 | josd-1 | C25D7.8.2 | Y71H2AR.3.1 | Ubiquitin thioesterase otubain-like; Hydrolase that can remove conjugated ubiquitin from proteins and plays an important regulatory role at the level of protein turnover by preventing degradation. Specifically cleaves 'Lys-48'-linked polyubiquitin. | Josephin domain-containing protein. | 0.708 |
| otub-1 | usp-33 | C25D7.8.2 | K09A9.4.1 | Ubiquitin thioesterase otubain-like; Hydrolase that can remove conjugated ubiquitin from proteins and plays an important regulatory role at the level of protein turnover by preventing degradation. Specifically cleaves 'Lys-48'-linked polyubiquitin. | Ubiquitin carboxyl-terminal hydrolase. | 0.731 |
| otub-1 | usp-5 | C25D7.8.2 | T27A3.2.1 | Ubiquitin thioesterase otubain-like; Hydrolase that can remove conjugated ubiquitin from proteins and plays an important regulatory role at the level of protein turnover by preventing degradation. Specifically cleaves 'Lys-48'-linked polyubiquitin. | Ubiquitin carboxyl-terminal hydrolase. | 0.854 |
| usp-33 | josd-1 | K09A9.4.1 | Y71H2AR.3.1 | Ubiquitin carboxyl-terminal hydrolase. | Josephin domain-containing protein. | 0.401 |
| usp-33 | otub-1 | K09A9.4.1 | C25D7.8.2 | Ubiquitin carboxyl-terminal hydrolase. | Ubiquitin thioesterase otubain-like; Hydrolase that can remove conjugated ubiquitin from proteins and plays an important regulatory role at the level of protein turnover by preventing degradation. Specifically cleaves 'Lys-48'-linked polyubiquitin. | 0.731 |
| usp-33 | usp-5 | K09A9.4.1 | T27A3.2.1 | Ubiquitin carboxyl-terminal hydrolase. | Ubiquitin carboxyl-terminal hydrolase. | 0.624 |
| usp-5 | cyk-3 | T27A3.2.1 | ZK328.1b.1 | Ubiquitin carboxyl-terminal hydrolase. | Ubiquitin carboxyl-terminal hydrolase cyk-3; Ubiquitin-protein hydrolase which cleaves ubiquitin from ubiquitinated proteins. Plays a role in embryo osmoregulation. Probably by regulating osmosis, controls actin redistribution in the 1-cell embryos and thus actin-dependent processes such as cytokinesis and P-granules segregation. During the first embryonic mitotic division, involved in the formation of a functional microtubule organizing center provided by the male pronucleus ; Belongs to the peptidase C19 family. | 0.831 |
| usp-5 | eif-3.H | T27A3.2.1 | C41D11.2.1 | Ubiquitin carboxyl-terminal hydrolase. | Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | 0.414 |
| usp-5 | josd-1 | T27A3.2.1 | Y71H2AR.3.1 | Ubiquitin carboxyl-terminal hydrolase. | Josephin domain-containing protein. | 0.584 |
| usp-5 | otub-1 | T27A3.2.1 | C25D7.8.2 | Ubiquitin carboxyl-terminal hydrolase. | Ubiquitin thioesterase otubain-like; Hydrolase that can remove conjugated ubiquitin from proteins and plays an important regulatory role at the level of protein turnover by preventing degradation. Specifically cleaves 'Lys-48'-linked polyubiquitin. | 0.854 |
| usp-5 | usp-33 | T27A3.2.1 | K09A9.4.1 | Ubiquitin carboxyl-terminal hydrolase. | Ubiquitin carboxyl-terminal hydrolase. | 0.624 |