STRINGSTRING
xpf-1 xpf-1 ape-1 ape-1 xpa-1 xpa-1 cyp-14A3 cyp-14A3 exo-3 exo-3 apn-1 apn-1 cyn-1 cyn-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
xpf-1ERCC4 domain-containing protein. (935 aa)
ape-1Apoptotic enhancer 1 protein; Negetively regulates apoptosis via its interaction with cep- 1. (769 aa)
xpa-1XPA_C domain-containing protein. (241 aa)
cyp-14A3CYtochrome P450 family; Belongs to the cytochrome P450 family. (498 aa)
exo-3DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (288 aa)
apn-1DNA-(apurinic or apyrimidinic site) lyase. (396 aa)
cyn-1Peptidyl-prolyl cis-trans isomerase 1; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (192 aa)
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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