Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Y73B6BL.12 | act-5 | Y73B6BL.12.1 | T25C8.2.2 | Thioredoxin; Belongs to the thioredoxin family. | ACTin. | 0.668 |
| Y73B6BL.12 | gsk-3 | Y73B6BL.12.1 | Y18D10A.5.1 | Thioredoxin; Belongs to the thioredoxin family. | Glycogen synthase kinase-3; Phosphorylates oma-1, a regulator of the oocyte-to-embryo transition, enabling its degradation. Phosphorylates skn-1, preventing it from accumulating in nuclei and thus inhibiting phase II gene expression in the oxidative stress defense. Involved in mesendoderm specification and mitotic spindle orientation in EMS blastomeres. Thought to be a branch point in these processes as proteins downstream are not required. Negatively regulates Wnt signaling in vulval precursor cells and acts as a Wnt-independent repressor of med-1 and med-2 in the C lineage inhibiting [...] | 0.477 |
| Y73B6BL.12 | trx-4 | Y73B6BL.12.1 | Y44E3A.3.1 | Thioredoxin; Belongs to the thioredoxin family. | Thioredoxin; Belongs to the thioredoxin family. | 0.621 |
| ZK970.8 | act-5 | ZK970.8.1 | T25C8.2.2 | Uncharacterized protein. | ACTin. | 0.912 |
| ZK970.8 | cdc-42 | ZK970.8.1 | R07G3.1.1 | Uncharacterized protein. | Cell division control protein 42 homolog; Plays an essential role in spindle orientation and organizing cellular and embryonic polarity by controlling the localization and activity of PAR (partitioning-defective) proteins. Required for maintaining the asymmetric cortical localization of the anterior complex proteins par-3 and par-6, the posterior cortical protein par-2, and pkc-3. Involved in hypodermal cell fusion, together with pak-1 and ced-10, leading to embryonic body elongation, which involves dramatic cytoskeletal reorganization. During gonad morphogenesis, plays a role in dista [...] | 0.927 |
| ZK970.8 | ced-10 | ZK970.8.1 | C09G12.8b.1 | Uncharacterized protein. | Ras-related protein ced-10; Required in engulfing to control the phagocytosis of apoptotic cell corpses. Required in embryonic development for the correct positioning and orientation of the mitotic spindles and division planes in blastomere cells. Involved in hypodermal cell fusion, together with pak-1 and cdc-42, leading to embryonic body elongation, which involves dramatic cytoskeletal reorganization. ced-2 and ced-5 function to activate ced-10 in a GTPase signaling pathway that controls the polarized extension of cell surfaces. Plays a redundant role with mig-2 in dorsal axonal guid [...] | 0.848 |
| ZK970.8 | ced-12 | ZK970.8.1 | Y106G6E.5b.1 | Uncharacterized protein. | Cell death abnormality protein 12; Involved in programmed apoptosis and necrosis. Required for the cell corpse engulfment process. Has roles in the formation of actin halos and distal tip cell migration. Negatively regulates the unc-6/Netrin receptor unc-5 to control distal tip cell migration along the anterior-posterior axis of the body. Plays no role in amphid axon outgrowth. | 0.568 |
| ZK970.8 | mig-2 | ZK970.8.1 | C35C5.4a.1 | Uncharacterized protein. | Rac-like GTPase. | 0.572 |
| ZK970.8 | tiam-1 | ZK970.8.1 | C11D9.1.1 | Uncharacterized protein. | DH domain-containing protein. | 0.863 |
| ZK970.8 | unc-40 | ZK970.8.1 | T19B4.7.1 | Uncharacterized protein. | Unc-40 protein. | 0.612 |
| ZK970.8 | unc-5 | ZK970.8.1 | B0273.4c.1 | Uncharacterized protein. | Netrin receptor unc-5; Receptor for netrin (unc-6) required for axon guidance. Mediates axon repulsion of neuronal growth cones in the developing nervous system upon ligand binding. Axon migration is mediated by the secreted unc-6, which promotes attraction of neurons and axons through binding to the unc-40 receptor, while repulsion requires both unc-5 and unc-40 receptors. Involved in the ventral-dorsal and anterior-posterior migration of distal tip cells along the body, which may be mediated by Wnt receptor mom-5, ced- 10/Rac, ced-12/ELMO and mig-2/RhoG. | 0.404 |
| ZK970.8 | unc-6 | ZK970.8.1 | F41C6.1.1 | Uncharacterized protein. | Netrin unc-6; Component of an extracellular matrix cue that guides dorsoventral migrations on the epidermis. Required for the guidance of pioneer axons and migrating cells along the body wall. During gonad morphogenesis, involved in distal tip cell (DTC) migration from the dorsal side of the hermaphrodite body to the midbody to allow for formation of gonad arms. Its association with either unc-40 or unc-5 receptors will lead to axon attraction or repulsion, respectively. Involved in the positioning of ray 1, the most anterior ray sensilium, in the male tail. Required for the formation [...] | 0.581 |
| ZK970.8 | unc-73 | ZK970.8.1 | F55C7.7a.1 | Uncharacterized protein. | Guanine nucleotide exchange factor UNC-73A. | 0.847 |
| act-5 | Y73B6BL.12 | T25C8.2.2 | Y73B6BL.12.1 | ACTin. | Thioredoxin; Belongs to the thioredoxin family. | 0.668 |
| act-5 | ZK970.8 | T25C8.2.2 | ZK970.8.1 | ACTin. | Uncharacterized protein. | 0.912 |
| act-5 | cdc-42 | T25C8.2.2 | R07G3.1.1 | ACTin. | Cell division control protein 42 homolog; Plays an essential role in spindle orientation and organizing cellular and embryonic polarity by controlling the localization and activity of PAR (partitioning-defective) proteins. Required for maintaining the asymmetric cortical localization of the anterior complex proteins par-3 and par-6, the posterior cortical protein par-2, and pkc-3. Involved in hypodermal cell fusion, together with pak-1 and ced-10, leading to embryonic body elongation, which involves dramatic cytoskeletal reorganization. During gonad morphogenesis, plays a role in dista [...] | 0.976 |
| act-5 | ced-10 | T25C8.2.2 | C09G12.8b.1 | ACTin. | Ras-related protein ced-10; Required in engulfing to control the phagocytosis of apoptotic cell corpses. Required in embryonic development for the correct positioning and orientation of the mitotic spindles and division planes in blastomere cells. Involved in hypodermal cell fusion, together with pak-1 and cdc-42, leading to embryonic body elongation, which involves dramatic cytoskeletal reorganization. ced-2 and ced-5 function to activate ced-10 in a GTPase signaling pathway that controls the polarized extension of cell surfaces. Plays a redundant role with mig-2 in dorsal axonal guid [...] | 0.879 |
| act-5 | chdp-1 | T25C8.2.2 | C10G11.7a.1 | ACTin. | Calponin-homology (CH) domain-containing protein. | 0.538 |
| act-5 | cpn-3 | T25C8.2.2 | F28H1.2.1 | ACTin. | Calponin-homology (CH) domain-containing protein. | 0.986 |
| act-5 | cpn-4 | T25C8.2.2 | F49D11.8.1 | ACTin. | Calponin-homology (CH) domain-containing protein. | 0.987 |
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