Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aos-1 | gei-17 | C08B6.9.1 | W10D5.3c.3 | SUMO-activating enzyme subunit aos-1; The dimeric enzyme acts as an E1 ligase for smo-1. It mediates ATP-dependent activation of smo-1 and formation of a thioester with a conserved cysteine residue on uba-2 (Probable). | E3 SUMO-protein ligase gei-17; Functions as an E3-type smo-1 ligase. Mediates smo-1 conjugation to air-2 in vitro and is required for proper chromosome alignment. In the early embryo, specifically suppresses checkpoint activation in response to DNA damage, maybe by promoting mus-101 sumoylation. In embryos, plays a role in determining telomere localization in the nucleus. | 0.898 |
| aos-1 | smo-1 | C08B6.9.1 | K12C11.2.1 | SUMO-activating enzyme subunit aos-1; The dimeric enzyme acts as an E1 ligase for smo-1. It mediates ATP-dependent activation of smo-1 and formation of a thioester with a conserved cysteine residue on uba-2 (Probable). | Small ubiquitin-related modifier; Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process. Plays a role in a number of cellular processes such as nuclear transport, DNA replication and repair, mitosis and signal transduction. Covalent attachment to its substrates requires prior activation by the E1 complex aos-1-uba-2 and linkage to the E2 enzyme ubc-9, and can be promoted by an E3 ligase such as gei-17. Required for embryonic dev [...] | 0.996 |
| aos-1 | uba-2 | C08B6.9.1 | W02A11.4.1 | SUMO-activating enzyme subunit aos-1; The dimeric enzyme acts as an E1 ligase for smo-1. It mediates ATP-dependent activation of smo-1 and formation of a thioester with a conserved cysteine residue on uba-2 (Probable). | SUMO-activating enzyme subunit uba-2; The dimeric enzyme acts as an E1 ligase for smo-1. It mediates ATP-dependent activation of smo-1 and formation of a thioester with a conserved cysteine residue on uba-2 (Probable). | 0.999 |
| aos-1 | ubc-9 | C08B6.9.1 | F29B9.6.2 | SUMO-activating enzyme subunit aos-1; The dimeric enzyme acts as an E1 ligase for smo-1. It mediates ATP-dependent activation of smo-1 and formation of a thioester with a conserved cysteine residue on uba-2 (Probable). | SUMO-conjugating enzyme UBC9; Accepts the ubiquitin-like protein smo-1 from the aos-1-uba-2 E1 complex and catalyzes its covalent attachment to other proteins with the help of an E3 ligase such as gei-17. Required to sumoylate the ETS transcription factor lin-1 and the Polycomb protein sop-2. Required for embryonic development, fertility, vulval morphogenesis and inhibition of vulval cell fates. Belongs to the ubiquitin-conjugating enzyme family. | 0.989 |
| apb-3 | apd-3 | R11A5.1a.1 | W09G10.4a.1 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. | 0.999 |
| apb-3 | apm-3 | R11A5.1a.1 | F53H8.1.1 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. | 0.999 |
| apb-3 | aps-3 | R11A5.1a.1 | Y48G8AL.14.1 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | Clat_adaptor_s domain-containing protein. | 0.998 |
| apb-3 | col-86 | R11A5.1a.1 | Y81G3A.5a.1 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | Col_cuticle_N domain-containing protein. | 0.668 |
| apb-3 | eri-1 | R11A5.1a.1 | T07A9.5b.1 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | 3'-5' exonuclease eri-1; RNA exonuclease that acts as a negative regulator of RNA interference (RNAi). Probably acts by degrading the 3'-overhangs of short interfering RNAs (siRNAs). Its tissue specificity may help explain the inefficiency of neuronal RNAi. | 0.410 |
| apd-3 | apb-3 | W09G10.4a.1 | R11A5.1a.1 | AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | 0.999 |
| apd-3 | apm-3 | W09G10.4a.1 | F53H8.1.1 | AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. | MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. | 0.999 |
| apd-3 | aps-3 | W09G10.4a.1 | Y48G8AL.14.1 | AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. | Clat_adaptor_s domain-containing protein. | 0.999 |
| apd-3 | col-86 | W09G10.4a.1 | Y81G3A.5a.1 | AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. | Col_cuticle_N domain-containing protein. | 0.800 |
| apd-3 | gei-17 | W09G10.4a.1 | W10D5.3c.3 | AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. | E3 SUMO-protein ligase gei-17; Functions as an E3-type smo-1 ligase. Mediates smo-1 conjugation to air-2 in vitro and is required for proper chromosome alignment. In the early embryo, specifically suppresses checkpoint activation in response to DNA damage, maybe by promoting mus-101 sumoylation. In embryos, plays a role in determining telomere localization in the nucleus. | 0.421 |
| apd-3 | max-1 | W09G10.4a.1 | C34B4.1b.1 | AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. | Motor AXon guidance. | 0.549 |
| apm-3 | apb-3 | F53H8.1.1 | R11A5.1a.1 | MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | 0.999 |
| apm-3 | apd-3 | F53H8.1.1 | W09G10.4a.1 | MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. | AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. | 0.999 |
| apm-3 | aps-3 | F53H8.1.1 | Y48G8AL.14.1 | MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. | Clat_adaptor_s domain-containing protein. | 0.997 |
| apm-3 | col-86 | F53H8.1.1 | Y81G3A.5a.1 | MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. | Col_cuticle_N domain-containing protein. | 0.695 |
| aps-3 | apb-3 | Y48G8AL.14.1 | R11A5.1a.1 | Clat_adaptor_s domain-containing protein. | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | 0.998 |
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