Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| F15E6.3 | F43G6.5 | F15E6.3.1 | F43G6.5.1 | RRM-type RNA binding protein. | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | 0.666 |
| F15E6.3 | T15H9.6 | F15E6.3.1 | T15H9.6.1 | RRM-type RNA binding protein. | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | 0.665 |
| F15E6.3 | fbf-1 | F15E6.3.1 | H12I13.4.1 | RRM-type RNA binding protein. | Fem-3 mRNA-binding factor 1; Involved in the control of stem cells and sex determination in the C.elegans hermaphrodite germline. May also play a role in the hermaphrodite germline proliferation and oogenesis. Binds specifically to the regulatory region of fem-3 3'-UTR and mediates the sperm/oocyte switch. Negatively regulates gld-3 expression, possibly by directly binding to two sites within the 3'-UTR of gld-3 isoform b. In association with the cye-1/cdk-2 complex, negatively regulates gld-1 expression in the distal germline cells of the mitotic zone. By binding to the 3'-UTR, repres [...] | 0.741 |
| F15E6.3 | fbf-2 | F15E6.3.1 | F21H12.5.1 | RRM-type RNA binding protein. | Fem-3 mRNA-binding factor 2; Involved in the control of stem cells and sex determination in the C.elegans hermaphrodite germline. May also play a role in the hermaphrodite germline proliferation and oogenesis. By binding to the 3'-UTR, represses phosphatase lip-1 expression in the distal part of the germline mitotic zone. Binds specifically to the regulatory region of fem-3 3'-UTR and mediates the sperm/oocyte switch. Negatively regulates gld-3 expression possibly by directly binding to two sites within the gld-3 isoform b 3'-UTR. Suppresses germline tumor formation by preventing the d [...] | 0.729 |
| F15E6.3 | fem-3 | F15E6.3.1 | C01F6.4a.1 | RRM-type RNA binding protein. | Sex-determination protein fem-3; Required for male development. In XO (male) animals, fem-3 directs male differentiation in all tissues. In XX (hermaphrodite) animals, it specifies the first 80 or so germ cells to be sperm. Negatively regulates male development when bound to tra-2. Together with fem-2 associates with the CBC(fem-1) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of tra-1. | 0.590 |
| F15E6.3 | glp-1 | F15E6.3.1 | F02A9.6.1 | RRM-type RNA binding protein. | Protein glp-1; Involved in the specification of the cell fates of the blastomeres, ABa and APa. Proper signaling by glp-1 induces ABa descendants to produce anterior pharyngeal cells, and APa descendants to adopt a different fate. Contributes to the establishment of the dorsal-ventral axis in early embryos. Regulates germ cell mitotic proliferation probably by regulating MAP kinase phosphatase lip-1 expression. Plays a negative role in lifespan. | 0.694 |
| F15E6.3 | pap-1 | F15E6.3.1 | Y32F6A.3.1 | RRM-type RNA binding protein. | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | 0.664 |
| F15E6.3 | puf-8 | F15E6.3.1 | C30G12.7.1 | RRM-type RNA binding protein. | PUM-HD domain-containing protein. | 0.695 |
| F43G6.5 | F15E6.3 | F43G6.5.1 | F15E6.3.1 | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | RRM-type RNA binding protein. | 0.666 |
| F43G6.5 | T15H9.6 | F43G6.5.1 | T15H9.6.1 | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | 0.984 |
| F43G6.5 | fbf-1 | F43G6.5.1 | H12I13.4.1 | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | Fem-3 mRNA-binding factor 1; Involved in the control of stem cells and sex determination in the C.elegans hermaphrodite germline. May also play a role in the hermaphrodite germline proliferation and oogenesis. Binds specifically to the regulatory region of fem-3 3'-UTR and mediates the sperm/oocyte switch. Negatively regulates gld-3 expression, possibly by directly binding to two sites within the 3'-UTR of gld-3 isoform b. In association with the cye-1/cdk-2 complex, negatively regulates gld-1 expression in the distal germline cells of the mitotic zone. By binding to the 3'-UTR, repres [...] | 0.513 |
| F43G6.5 | fbf-2 | F43G6.5.1 | F21H12.5.1 | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | Fem-3 mRNA-binding factor 2; Involved in the control of stem cells and sex determination in the C.elegans hermaphrodite germline. May also play a role in the hermaphrodite germline proliferation and oogenesis. By binding to the 3'-UTR, represses phosphatase lip-1 expression in the distal part of the germline mitotic zone. Binds specifically to the regulatory region of fem-3 3'-UTR and mediates the sperm/oocyte switch. Negatively regulates gld-3 expression possibly by directly binding to two sites within the gld-3 isoform b 3'-UTR. Suppresses germline tumor formation by preventing the d [...] | 0.818 |
| F43G6.5 | fem-3 | F43G6.5.1 | C01F6.4a.1 | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | Sex-determination protein fem-3; Required for male development. In XO (male) animals, fem-3 directs male differentiation in all tissues. In XX (hermaphrodite) animals, it specifies the first 80 or so germ cells to be sperm. Negatively regulates male development when bound to tra-2. Together with fem-2 associates with the CBC(fem-1) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of tra-1. | 0.590 |
| F43G6.5 | pap-1 | F43G6.5.1 | Y32F6A.3.1 | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | 0.904 |
| F43G6.5 | puf-8 | F43G6.5.1 | C30G12.7.1 | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | PUM-HD domain-containing protein. | 0.600 |
| T15H9.6 | F15E6.3 | T15H9.6.1 | F15E6.3.1 | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | RRM-type RNA binding protein. | 0.665 |
| T15H9.6 | F43G6.5 | T15H9.6.1 | F43G6.5.1 | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | 0.984 |
| T15H9.6 | fbf-1 | T15H9.6.1 | H12I13.4.1 | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | Fem-3 mRNA-binding factor 1; Involved in the control of stem cells and sex determination in the C.elegans hermaphrodite germline. May also play a role in the hermaphrodite germline proliferation and oogenesis. Binds specifically to the regulatory region of fem-3 3'-UTR and mediates the sperm/oocyte switch. Negatively regulates gld-3 expression, possibly by directly binding to two sites within the 3'-UTR of gld-3 isoform b. In association with the cye-1/cdk-2 complex, negatively regulates gld-1 expression in the distal germline cells of the mitotic zone. By binding to the 3'-UTR, repres [...] | 0.512 |
| T15H9.6 | fbf-2 | T15H9.6.1 | F21H12.5.1 | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | Fem-3 mRNA-binding factor 2; Involved in the control of stem cells and sex determination in the C.elegans hermaphrodite germline. May also play a role in the hermaphrodite germline proliferation and oogenesis. By binding to the 3'-UTR, represses phosphatase lip-1 expression in the distal part of the germline mitotic zone. Binds specifically to the regulatory region of fem-3 3'-UTR and mediates the sperm/oocyte switch. Negatively regulates gld-3 expression possibly by directly binding to two sites within the gld-3 isoform b 3'-UTR. Suppresses germline tumor formation by preventing the d [...] | 0.816 |
| T15H9.6 | fem-3 | T15H9.6.1 | C01F6.4a.1 | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | Sex-determination protein fem-3; Required for male development. In XO (male) animals, fem-3 directs male differentiation in all tissues. In XX (hermaphrodite) animals, it specifies the first 80 or so germ cells to be sperm. Negatively regulates male development when bound to tra-2. Together with fem-2 associates with the CBC(fem-1) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of tra-1. | 0.581 |
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