Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| act-5 | aqp-8 | T25C8.2.2 | K02G10.7b.1 | ACTin. | AQuaPorin or aquaglyceroporin related; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.439 |
| act-5 | erm-1 | T25C8.2.2 | C01G8.5b.1 | ACTin. | FERM domain-containing protein. | 0.816 |
| act-5 | ifb-1 | T25C8.2.2 | F10C1.2b.1 | ACTin. | Intermediate filament protein ifb-1; Cytoplasmic intermediate filaments provide mechanical strength to cells. Essential protein, involved in attachment structures in epidermal cells that connect muscles to the external cuticle. Required in morphogenesis and epidermal integrity. Probable component of embryonic epidermal attachment structures. Functions in larval muscle attachment independently of ifa-2. | 0.477 |
| act-5 | ifb-2 | T25C8.2.2 | F10C1.7e.1 | ACTin. | Intermediate filament protein ifb-2; Cytoplasmic intermediate filaments provide mechanical strength to cells. Not essential protein. Component of the terminal web (organelle-depleted, intermediate filament-rich layer of cytoplasm that underlies the apical microvilli of polarized epithelial cells) in embryonic through to adult gut cells. Correct localization of filaments requires let-413. | 0.720 |
| act-5 | ifc-2 | T25C8.2.2 | M6.1b.1 | ACTin. | Intermediate filament protein ifc-2; Cytoplasmic intermediate filaments provide mechanical strength to cells. Not essential protein, although its absence leads to mild defects in locomotion. | 0.551 |
| act-5 | rab-5 | T25C8.2.2 | F26H9.6.1 | ACTin. | RAB family. | 0.904 |
| act-5 | rab-7 | T25C8.2.2 | W03C9.3.2 | ACTin. | RAB family. | 0.513 |
| act-5 | rol-6 | T25C8.2.2 | T01B7.7.2 | ACTin. | Cuticle collagen rol-6; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Involved in body morphogenesis. | 0.724 |
| act-5 | spc-1 | T25C8.2.2 | K10B3.10b.1 | ACTin. | SPeCtrin. | 0.587 |
| act-5 | tbb-2 | T25C8.2.2 | C36E8.5.4 | ACTin. | Tubulin beta-2 chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain; Belongs to the tubulin family. | 0.562 |
| act-5 | unc-54 | T25C8.2.2 | F11C3.3.2 | ACTin. | Myosin-4; Required for muscle contraction. Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.855 |
| aqp-8 | act-5 | K02G10.7b.1 | T25C8.2.2 | AQuaPorin or aquaglyceroporin related; Belongs to the MIP/aquaporin (TC 1.A.8) family. | ACTin. | 0.439 |
| aqp-8 | erm-1 | K02G10.7b.1 | C01G8.5b.1 | AQuaPorin or aquaglyceroporin related; Belongs to the MIP/aquaporin (TC 1.A.8) family. | FERM domain-containing protein. | 0.727 |
| erm-1 | act-5 | C01G8.5b.1 | T25C8.2.2 | FERM domain-containing protein. | ACTin. | 0.816 |
| erm-1 | aqp-8 | C01G8.5b.1 | K02G10.7b.1 | FERM domain-containing protein. | AQuaPorin or aquaglyceroporin related; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.727 |
| erm-1 | ifa-4 | C01G8.5b.1 | K05B2.3.1 | FERM domain-containing protein. | Intermediate filament protein ifa-4; Cytoplasmic intermediate filaments provide mechanical strength to cells. Non-essential protein. | 0.627 |
| erm-1 | ifb-1 | C01G8.5b.1 | F10C1.2b.1 | FERM domain-containing protein. | Intermediate filament protein ifb-1; Cytoplasmic intermediate filaments provide mechanical strength to cells. Essential protein, involved in attachment structures in epidermal cells that connect muscles to the external cuticle. Required in morphogenesis and epidermal integrity. Probable component of embryonic epidermal attachment structures. Functions in larval muscle attachment independently of ifa-2. | 0.574 |
| erm-1 | ifb-2 | C01G8.5b.1 | F10C1.7e.1 | FERM domain-containing protein. | Intermediate filament protein ifb-2; Cytoplasmic intermediate filaments provide mechanical strength to cells. Not essential protein. Component of the terminal web (organelle-depleted, intermediate filament-rich layer of cytoplasm that underlies the apical microvilli of polarized epithelial cells) in embryonic through to adult gut cells. Correct localization of filaments requires let-413. | 0.862 |
| erm-1 | ifc-2 | C01G8.5b.1 | M6.1b.1 | FERM domain-containing protein. | Intermediate filament protein ifc-2; Cytoplasmic intermediate filaments provide mechanical strength to cells. Not essential protein, although its absence leads to mild defects in locomotion. | 0.718 |
| ifa-1 | ifa-4 | F38B2.1d.1 | K05B2.3.1 | Intermediate filament protein ifa-1; Cytoplasmic intermediate filaments make up the structural component of the cytoskeleton providing mechanical strength to cells. Essential protein required during embryogenesis especially for survival past the L1 larva stage, involved in intestine morphogenesis. | Intermediate filament protein ifa-4; Cytoplasmic intermediate filaments provide mechanical strength to cells. Non-essential protein. | 0.657 |
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