9 items (Caenorhabditis elegans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	clp-9	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (718 aa)
	clp-6	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (627 aa)
	clp-3	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (752 aa)
	clp-4	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (716 aa)
	clp-10	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (634 aa)
	clp-7	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (778 aa)
	clp-2	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (805 aa)
	K09A9.6	TPR_REGION domain-containing protein. (920 aa)
	clp-8	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (646 aa)

Your Current Organism:

Caenorhabditis elegans

NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K09A9.6	clp-10	K09A9.6b.1	W05G11.4.1	TPR_REGION domain-containing protein.	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	0.539
K09A9.6	clp-2	K09A9.6b.1	T04A8.16.1	TPR_REGION domain-containing protein.	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	0.542
K09A9.6	clp-3	K09A9.6b.1	Y47H10A.1.1	TPR_REGION domain-containing protein.	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	0.472
K09A9.6	clp-4	K09A9.6b.1	Y39A3CL.5a.1	TPR_REGION domain-containing protein.	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	0.481
K09A9.6	clp-6	K09A9.6b.1	Y77E11A.10.1	TPR_REGION domain-containing protein.	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	0.475
K09A9.6	clp-7	K09A9.6b.1	Y77E11A.11a.2	TPR_REGION domain-containing protein.	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	0.471
K09A9.6	clp-8	K09A9.6b.1	F44F1.3.1	TPR_REGION domain-containing protein.	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	0.538
K09A9.6	clp-9	K09A9.6b.1	T11A5.6a.1	TPR_REGION domain-containing protein.	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	0.487
clp-10	K09A9.6	W05G11.4.1	K09A9.6b.1	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	TPR_REGION domain-containing protein.	0.539
clp-2	K09A9.6	T04A8.16.1	K09A9.6b.1	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	TPR_REGION domain-containing protein.	0.542
clp-3	K09A9.6	Y47H10A.1.1	K09A9.6b.1	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	TPR_REGION domain-containing protein.	0.472
clp-4	K09A9.6	Y39A3CL.5a.1	K09A9.6b.1	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	TPR_REGION domain-containing protein.	0.481
clp-6	K09A9.6	Y77E11A.10.1	K09A9.6b.1	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	TPR_REGION domain-containing protein.	0.475
clp-7	K09A9.6	Y77E11A.11a.2	K09A9.6b.1	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	TPR_REGION domain-containing protein.	0.471
clp-8	K09A9.6	F44F1.3.1	K09A9.6b.1	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	TPR_REGION domain-containing protein.	0.538
clp-9	K09A9.6	T11A5.6a.1	K09A9.6b.1	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	TPR_REGION domain-containing protein.	0.487