STRINGSTRING
col-41 col-41 col-34 col-34 ram-2 ram-2 dpy-7 dpy-7 dpy-11 dpy-11 F49B2.6 F49B2.6 noah-2 noah-2 che-14 che-14 F57F4.4 F57F4.4 cbd-1 cbd-1 let-805 let-805 egg-6 egg-6 mup-4 mup-4 vit-6 vit-6 mua-3 mua-3 R03G8.4 R03G8.4 R03G8.6 R03G8.6 cut-5 cut-5 nphp-4 nphp-4 rol-6 rol-6 anp-1 anp-1 dpy-2 dpy-2 dpy-10 dpy-10 col-142 col-142 col-141 col-141 ram-5 ram-5 act-5 act-5 dbl-1 dbl-1 par-6 par-6 lec-10 lec-10 ule-1 ule-1 lpr-3 lpr-3 Y42A5A.1 Y42A5A.1 dpy-18 dpy-18 ral-1 ral-1 lec-6 lec-6 lon-8 lon-8 ule-5 ule-5 lpr-1 lpr-1 Y67D8C.9 Y67D8C.9 pod-1 pod-1 abu-14 abu-14 lap-1 lap-1 fbn-1 fbn-1 nas-6 nas-6 cpg-2 cpg-2 sqt-1 sqt-1 adt-1 adt-1 nas-7 nas-7 cpg-1 cpg-1 mlt-10 mlt-10 bli-1 bli-1 tmem-131 tmem-131 let-653 let-653 noah-1 noah-1 dyf-7 dyf-7 perm-2 perm-2 perm-4 perm-4 let-4 let-4 sym-1 sym-1 ilys-3 ilys-3 cut-1 cut-1 dex-1 dex-1 cut-4 cut-4 dpy-3 dpy-3 ceh-60 ceh-60 cut-3 cut-3 sqt-3 sqt-3 dpy-5 dpy-5 acs-20 acs-20 dpy-13 dpy-13 daf-6 daf-6 cpz-1 cpz-1 fasn-1 fasn-1 vha-5 vha-5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
col-41Col_cuticle_N domain-containing protein. (428 aa)
col-34Cuticle collagen 34; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. (299 aa)
ram-2Col_cuticle_N domain-containing protein. (306 aa)
dpy-7Cuticle collagen dpy-7; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-7 affects the body shape. (318 aa)
dpy-11Thioredoxin domain-containing protein. (246 aa)
F49B2.6Aminopeptidase. (1082 aa)
noah-2NOmpA Homolog (Drosophila nompA: no mechanoreceptor potential A). (741 aa)
che-14SSD domain-containing protein. (917 aa)
F57F4.4Uncharacterized protein. (2090 aa)
cbd-1Chitin-binding domain protein cbd-1; In unfertilized oocytes, maintains egg-1 and egg-2 at the plasma membrane together with chitin synthase chs-1 and kinase mbk-2. Essential for the formation of a continuous and cohesive chitin layer following fertilization. (1319 aa)
let-805Myotactin form B. (4450 aa)
egg-6Leucine-rich repeat-containing protein egg-6; Required for apical extracellular matrix organization and epithelial junction maintenance. (961 aa)
mup-4Transmembrane matrix receptor MUP-4; Required for junctional attachments between hypodermis and muscle, and between the apical epithelial surface and the cuticular matrix. Essential for enclosure of the embryo by the hypodermis, hypodermal integrity, embryo elongation, and maintenance of hypodermal morphology in fully elongated embryos. (2104 aa)
vit-6Vitellogenin-6; Precursor of the egg-yolk proteins that are sources of nutrients during embryonic development (Probable). May play a role in cholesterol uptake. May be involved in thermotolerance. (1651 aa)
mua-3Transmembrane cell adhesion receptor mua-3; Involved in cell adhesion and required for organ positioning and attachment. At the hypodermal surface, required for attachment of the hypdermermis to the basal cuticle in postembryonic development, possibly through intermediate filaments of the cytoskeleton. (3767 aa)
R03G8.4Aminopeptidase. (786 aa)
R03G8.6Aminopeptidase. (747 aa)
cut-5ZP domain-containing protein. (395 aa)
nphp-4NePHronoPhthisis (Human kidney disease) homolog. (1305 aa)
rol-6Cuticle collagen rol-6; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Involved in body morphogenesis. (348 aa)
anp-1Aminopeptidase. (988 aa)
dpy-2Cuticle collagen dpy-2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-2 affects the body shape. (380 aa)
dpy-10Cuticle collagen dpy-10; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. (356 aa)
col-142Col_cuticle_N domain-containing protein. (325 aa)
col-141Col_cuticle_N domain-containing protein. (314 aa)
ram-5ZP domain-containing protein. (711 aa)
act-5ACTin. (375 aa)
dbl-1TGF_BETA_2 domain-containing protein. (365 aa)
par-6Partitioning defective protein 6; Necessary for apicobasal and anterior-posterior asymmetries associated with cell adhesion and gastrulation during the first few cell cycles of embryogenesis. Required for localizing/ maintaining par-3 at the cell periphery. Regulates mes-1 expression and/or localization pattern during early embryogenesis. Acts together with par-3 and pkc-3 in maintaining epithelial cell polarity in the distal spermatheca. Plays a role in endosome and Golgi body positioning. Belongs to the PAR6 family. (309 aa)
lec-10Galectin. (192 aa)
ule-1Uterine Lumin Expressed/locailized. (235 aa)
lpr-3LiPocalin-Related protein. (569 aa)
Y42A5A.1Aminopeptidase. (1045 aa)
dpy-18Prolyl 4-hydroxylase subunit alpha-1; Catalyzes the post-translational formation of 4- hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins; Belongs to the P4HA family. (559 aa)
ral-1RAL (Ras-related GTPase) homolog. (254 aa)
lec-6Galectin. (146 aa)
lon-8Protein lon-8; Secreted protein that is involved in larval elongation, early adult growth and male tail development. (162 aa)
ule-5Uterine Lumin Expressed/locailized. (181 aa)
lpr-1LiPocalin-Related protein. (275 aa)
Y67D8C.9Uncharacterized protein. (1144 aa)
pod-1Uncharacterized protein. (1136 aa)
abu-14Activated in Blocked Unfolded protein response. (373 aa)
lap-1Leucine aminopeptidase 1; Probably acts as a digestive enzyme. (491 aa)
fbn-1FiBrilliN homolog. (2781 aa)
nas-6Zinc metalloproteinase nas-6; Metalloprotease. (344 aa)
cpg-2Chondroitin proteoglycan-2; Required for polar body extrusion during cytokinesis in embryo development. Affects cortical granule size. Has roles in meiotic chromosome segregation, osmotic barrier function and polarization in conjunction with cpg-2. Binds chitin. (524 aa)
sqt-1Cuticle collagen sqt-1; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. This is a collagen critical for organismal morphogenesis. Mutations in sqt-1 can lengthen, shorten, or helically twist the entire animal. (324 aa)
adt-1A disintegrin and metalloproteinase with thrombospondin motifs adt-1; Plays a role in ray morphogenesis in the male tail, probably by remodeling the extracellular matrix (ECM) in the cuticle. (1461 aa)
nas-7Zinc metalloproteinase nas-7; Metalloprotease. (382 aa)
cpg-1Chondroitin proteoglycan 1; Required for polar body extrusion during cytokinesis in embryo development. Affects cortical granule size. Has roles in meiotic chromosome segregation, osmotic barrier function and polarization in conjunction with cpg-2. Binds chitin. (584 aa)
mlt-10Uncharacterized protein. (690 aa)
bli-1Cuticle collagen bli-1; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. This collagen is required for proper strut formation within the unique medial layer of the adult cuticle. (948 aa)
tmem-131TMEM131_like domain-containing protein. (1831 aa)
let-653Protein let-653; Required for epithelial tube development and shaping. Involved in the morphogenesis and function of the three unicellular tubes of the excretory system, the canal cell, the duct cell and the pore cell. Also plays a role in cuticle development, alae formation and shaping of the vulval lumen. Required for larval development. (812 aa)
noah-1NOmpA Homolog (Drosophila nompA: no mechanoreceptor potential A). (1052 aa)
dyf-7Protein dyf-7; Required for permeability of amphid and phasmid neurons to external dyes, chemotaxis to ammonium chloride, avoidance of high osmotic stimuli, male mating and dauer formation. Along with dex-1, enables neurite growth and maintenance by anchoring amphid dendritic tips during neuron cell body migration in embryonic and larval development. (446 aa)
perm-2PERMeable eggshell. (203 aa)
perm-4PERMeable eggshell. (331 aa)
let-4Leucine-rich repeat-containing protein let-4; Required for apical extracellular matrix organization and epithelial junction maintenance. (773 aa)
sym-1SYM-1 protein. (680 aa)
ilys-3Invertebrate-type lysozyme 3; Has bacteriolytic activity against Gram-positive bacteria. Plays a role in defense against bacterial pathogens. Involved in pharyngeal grinder function by enabling proper lysis of ingested bacteria; Belongs to the glycosyl hydrolase 22 family. Type-I lysozyme subfamily. (139 aa)
cut-1Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. (424 aa)
dex-1Dendrite extension defective protein 1; Along with dyf-7, enables neurite growth and maintenance by anchoring amphid dendritic tips during neuron cell body migration in embryonic and larval development. (1137 aa)
cut-4ZP domain-containing protein. (507 aa)
dpy-3Col_cuticle_N domain-containing protein. (302 aa)
ceh-60Homeobox domain-containing protein. (360 aa)
cut-3ZP domain-containing protein. (389 aa)
sqt-3Cuticle collagen 1; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. (301 aa)
dpy-5Cuticle collagen dpy-5; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. (284 aa)
acs-20Fatty Acid CoA Synthetase family. (684 aa)
dpy-13Cuticle collagen dpy-13; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-13 affects the body shape. (302 aa)
daf-6SSD domain-containing protein. (913 aa)
cpz-1Cathepsin Z-1; Exhibits carboxy-monopeptidase as well as carboxy-dipeptidase activity (By similarity). Plays an essential role in molting, a process during larval stages in which a new cuticle is formed and the old cuticle is shed. Probably, required for the degradation of the old cuticle. Belongs to the peptidase C1 family. (306 aa)
fasn-1Carrier domain-containing protein. (2613 aa)
vha-5V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (873 aa)
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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