Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| F16F9.3 | F47D2.11 | F16F9.3b.1 | F47D2.11.1 | EF-hand domain-containing protein. | Uncharacterized protein. | 0.663 |
| F16F9.3 | dyf-7 | F16F9.3b.1 | C43C3.3.1 | EF-hand domain-containing protein. | Protein dyf-7; Required for permeability of amphid and phasmid neurons to external dyes, chemotaxis to ammonium chloride, avoidance of high osmotic stimuli, male mating and dauer formation. Along with dex-1, enables neurite growth and maintenance by anchoring amphid dendritic tips during neuron cell body migration in embryonic and larval development. | 0.539 |
| F16F9.3 | ttx-1 | F16F9.3b.1 | Y113G7A.6a.1 | EF-hand domain-containing protein. | Homeobox domain-containing protein. | 0.465 |
| F16F9.3 | ver-1 | F16F9.3b.1 | T17A3.1.1 | EF-hand domain-containing protein. | Protein ver-1; Involved in amphid glia remodeling during entry into dauer stage by promoting the fusion of sheath amphid cells which encloses AWC neuron sensory endings. May be involved, downstream of pvf-1, in the positioning of ray 1, the most anterior ray sensillum in the male tail. | 0.693 |
| F16F9.3 | ztf-16 | F16F9.3b.1 | R08E3.4b.1 | EF-hand domain-containing protein. | Zinc finger protein ztf-16; Positively regulates the expression of ver-1 in the amphid sheath glia of amphid sensory neurons. Together with ehn-3, plays a role in somatic gonad development and is required for proper gonadal primordium assembly and somatic gonad precursor cell morphology ; Belongs to the Ikaros C2H2-type zinc-finger protein family. | 0.743 |
| F47D2.11 | F16F9.3 | F47D2.11.1 | F16F9.3b.1 | Uncharacterized protein. | EF-hand domain-containing protein. | 0.663 |
| F47D2.11 | ttx-1 | F47D2.11.1 | Y113G7A.6a.1 | Uncharacterized protein. | Homeobox domain-containing protein. | 0.662 |
| F47D2.11 | ver-1 | F47D2.11.1 | T17A3.1.1 | Uncharacterized protein. | Protein ver-1; Involved in amphid glia remodeling during entry into dauer stage by promoting the fusion of sheath amphid cells which encloses AWC neuron sensory endings. May be involved, downstream of pvf-1, in the positioning of ray 1, the most anterior ray sensillum in the male tail. | 0.758 |
| F47D2.11 | ztf-1 | F47D2.11.1 | F54F2.5a.1 | Uncharacterized protein. | Zinc finger transcription factor family protein 1. | 0.617 |
| F47D2.11 | ztf-16 | F47D2.11.1 | R08E3.4b.1 | Uncharacterized protein. | Zinc finger protein ztf-16; Positively regulates the expression of ver-1 in the amphid sheath glia of amphid sensory neurons. Together with ehn-3, plays a role in somatic gonad development and is required for proper gonadal primordium assembly and somatic gonad precursor cell morphology ; Belongs to the Ikaros C2H2-type zinc-finger protein family. | 0.809 |
| aff-1 | ttx-1 | C44B7.3.1 | Y113G7A.6a.1 | Cell fusion protein aff-1; Required for cell fusion events during development including the fusion of anchor cells (AC), vulval A and vulval D rings, and late epidermal seam cells. Required for amphid sheath cell fusion induced by entry into dauer stage. | Homeobox domain-containing protein. | 0.670 |
| aff-1 | ver-1 | C44B7.3.1 | T17A3.1.1 | Cell fusion protein aff-1; Required for cell fusion events during development including the fusion of anchor cells (AC), vulval A and vulval D rings, and late epidermal seam cells. Required for amphid sheath cell fusion induced by entry into dauer stage. | Protein ver-1; Involved in amphid glia remodeling during entry into dauer stage by promoting the fusion of sheath amphid cells which encloses AWC neuron sensory endings. May be involved, downstream of pvf-1, in the positioning of ray 1, the most anterior ray sensillum in the male tail. | 0.758 |
| aff-1 | ztf-16 | C44B7.3.1 | R08E3.4b.1 | Cell fusion protein aff-1; Required for cell fusion events during development including the fusion of anchor cells (AC), vulval A and vulval D rings, and late epidermal seam cells. Required for amphid sheath cell fusion induced by entry into dauer stage. | Zinc finger protein ztf-16; Positively regulates the expression of ver-1 in the amphid sheath glia of amphid sensory neurons. Together with ehn-3, plays a role in somatic gonad development and is required for proper gonadal primordium assembly and somatic gonad precursor cell morphology ; Belongs to the Ikaros C2H2-type zinc-finger protein family. | 0.708 |
| daf-7 | ttx-1 | B0412.2.1 | Y113G7A.6a.1 | Dauer larva development regulatory growth factor daf-7; May act as a negative regulator of dauer larva development by transducing chemosensory information from ASI neurons. Involved in sensitivity to CO2 levels. | Homeobox domain-containing protein. | 0.452 |
| dpy-10 | tbb-2 | T14B4.7.1 | C36E8.5.4 | Cuticle collagen dpy-10; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Tubulin beta-2 chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain; Belongs to the tubulin family. | 0.708 |
| dpy-10 | unc-119 | T14B4.7.1 | M142.1c.1 | Cuticle collagen dpy-10; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Protein unc-119; Myristoyl-binding protein that acts as a cargo adapter: specifically binds the myristoyl moiety of a subset of N-terminally myristoylated proteins and is required for their localization. Plays a key role in ciliary membrane localization of proteins. Required for the establishment or function of the nervous system. | 0.815 |
| dyf-7 | F16F9.3 | C43C3.3.1 | F16F9.3b.1 | Protein dyf-7; Required for permeability of amphid and phasmid neurons to external dyes, chemotaxis to ammonium chloride, avoidance of high osmotic stimuli, male mating and dauer formation. Along with dex-1, enables neurite growth and maintenance by anchoring amphid dendritic tips during neuron cell body migration in embryonic and larval development. | EF-hand domain-containing protein. | 0.539 |
| tbb-2 | dpy-10 | C36E8.5.4 | T14B4.7.1 | Tubulin beta-2 chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain; Belongs to the tubulin family. | Cuticle collagen dpy-10; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.708 |
| tbb-2 | unc-119 | C36E8.5.4 | M142.1c.1 | Tubulin beta-2 chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain; Belongs to the tubulin family. | Protein unc-119; Myristoyl-binding protein that acts as a cargo adapter: specifically binds the myristoyl moiety of a subset of N-terminally myristoylated proteins and is required for their localization. Plays a key role in ciliary membrane localization of proteins. Required for the establishment or function of the nervous system. | 0.894 |
| ttx-1 | F16F9.3 | Y113G7A.6a.1 | F16F9.3b.1 | Homeobox domain-containing protein. | EF-hand domain-containing protein. | 0.465 |
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