Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| C17H12.5 | C17H12.8 | C17H12.5.1 | C17H12.8.2 | Uncharacterized protein. | CUB_2 domain-containing protein. | 0.501 |
| C17H12.5 | K08D8.5 | C17H12.5.1 | K08D8.5.1 | Uncharacterized protein. | CUB_2 domain-containing protein. | 0.578 |
| C17H12.5 | T24B8.5 | C17H12.5.1 | T24B8.5.1 | Uncharacterized protein. | Uncharacterized protein. | 0.459 |
| C17H12.5 | dod-6 | C17H12.5.1 | T20G5.7.1 | Uncharacterized protein. | ShKT domain-containing protein. | 0.581 |
| C17H12.5 | isy-1 | C17H12.5.1 | F53B7.3.2 | Uncharacterized protein. | Protein isy-1; Regulates the processing of the mir-60 microRNA (miRNA), which in turn negatively regulates the expression of the transcription factor zip-10. Does not affect the splicing of zip-10 ; Belongs to the ISY1 family. | 0.698 |
| C17H12.5 | valv-1 | C17H12.5.1 | B0496.7.1 | Uncharacterized protein. | LIM zinc-binding domain-containing protein. | 0.759 |
| C17H12.5 | zip-10 | C17H12.5.1 | T27F2.4.1 | Uncharacterized protein. | Transcription factor zip-10; Transcription factor that regulates the expression of genes in response to changes in temperature. In particular, binds to the promoter region of genes such as asp-17 in response to severe cold to warm temperature transitions to promote gene expression. Promotes stress-induced death, particularly in older animals, following cold shock followed by warming and this may have evolved as a form of kin survival under thermal stress conditions, favoring the survival of younger animals. | 0.608 |
| C17H12.8 | C17H12.5 | C17H12.8.2 | C17H12.5.1 | CUB_2 domain-containing protein. | Uncharacterized protein. | 0.501 |
| C17H12.8 | K08D8.5 | C17H12.8.2 | K08D8.5.1 | CUB_2 domain-containing protein. | CUB_2 domain-containing protein. | 0.940 |
| C17H12.8 | T24B8.5 | C17H12.8.2 | T24B8.5.1 | CUB_2 domain-containing protein. | Uncharacterized protein. | 0.860 |
| C17H12.8 | pmk-1 | C17H12.8.2 | B0218.3.1 | CUB_2 domain-containing protein. | Mitogen-activated protein kinase pmk-1; Serine/threonine kinase which responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating downstream targets. Phosphorylates snk-1 which probably regulates skn-1 nuclear translocation in response to oxidative stress. Probably by activating skn-1, involved in the up- regulation of gcs-1 and glutathione-S-transferase gst-4 expression upon bacteria infection. Up-regulates expression of gcs-1 in intestinal cells upon arsenite treatment. Functions downstream of the MAPKK sek-1 and the MAPKKK nsy-1 as the MAP kinase [...] | 0.698 |
| K08D8.5 | C17H12.5 | K08D8.5.1 | C17H12.5.1 | CUB_2 domain-containing protein. | Uncharacterized protein. | 0.578 |
| K08D8.5 | C17H12.8 | K08D8.5.1 | C17H12.8.2 | CUB_2 domain-containing protein. | CUB_2 domain-containing protein. | 0.940 |
| K08D8.5 | T24B8.5 | K08D8.5.1 | T24B8.5.1 | CUB_2 domain-containing protein. | Uncharacterized protein. | 0.929 |
| K08D8.5 | nsy-1 | K08D8.5.1 | F59A6.1a.1 | CUB_2 domain-containing protein. | Mitogen-activated protein kinase kinase kinase nsy-1; Serine/threonine-protein kinase which, by phosphorylating and activating sek-1, plays an important role in the activation of the p38 pathway also composed of the downstream effectors sek-1 and pmk-1. Downstream of CaMKII unc-43 and adapter protein tir-1, plays a role in determining asymmetric cell fates in olfactory AWC neurons during neuronal development. Activation results in the repression of odorant receptor str-2 expression in one of the 2 AWC neurons. Involved in resistance to pathogenic Gram-positive and Gram-negative bacteri [...] | 0.615 |
| K08D8.5 | pmk-1 | K08D8.5.1 | B0218.3.1 | CUB_2 domain-containing protein. | Mitogen-activated protein kinase pmk-1; Serine/threonine kinase which responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating downstream targets. Phosphorylates snk-1 which probably regulates skn-1 nuclear translocation in response to oxidative stress. Probably by activating skn-1, involved in the up- regulation of gcs-1 and glutathione-S-transferase gst-4 expression upon bacteria infection. Up-regulates expression of gcs-1 in intestinal cells upon arsenite treatment. Functions downstream of the MAPKK sek-1 and the MAPKKK nsy-1 as the MAP kinase [...] | 0.810 |
| K08D8.5 | sek-1 | K08D8.5.1 | R03G5.2.1 | CUB_2 domain-containing protein. | Dual specificity mitogen-activated protein kinase kinase sek-1; Dual specificity protein kinase which acts as an essential component of the p38 signal transduction pathway which is also composed of upstream effector nsy-1 and downstream effector pmk-1. May phosphorylate pmk-1. Downstream of CaMKII unc-43 and adapter protein tir- 1, plays a role in determining asymmetric cell fates in olfactory AWC neurons during neuronal development. Activation results in the repression of odorant receptor str-2 expression in one of the 2 AWC neurons. Involved in resistance to pathogenic Gram-positive [...] | 0.580 |
| T24B8.5 | C17H12.5 | T24B8.5.1 | C17H12.5.1 | Uncharacterized protein. | Uncharacterized protein. | 0.459 |
| T24B8.5 | C17H12.8 | T24B8.5.1 | C17H12.8.2 | Uncharacterized protein. | CUB_2 domain-containing protein. | 0.860 |
| T24B8.5 | K08D8.5 | T24B8.5.1 | K08D8.5.1 | Uncharacterized protein. | CUB_2 domain-containing protein. | 0.929 |
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