Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| acs-17 | acs-4 | C46F4.2.2 | F37C12.7.1 | Fatty Acid CoA Synthetase family. | Fatty Acid CoA Synthetase family. | 0.760 |
| acs-17 | fasn-1 | C46F4.2.2 | F32H2.5.1 | Fatty Acid CoA Synthetase family. | Carrier domain-containing protein. | 0.950 |
| acs-17 | nmt-1 | C46F4.2.2 | T17E9.2b.1 | Fatty Acid CoA Synthetase family. | Probable glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins. | 0.421 |
| acs-17 | pod-2 | C46F4.2.2 | W09B6.1c.1 | Fatty Acid CoA Synthetase family. | Uncharacterized protein. | 0.548 |
| acs-4 | acs-17 | F37C12.7.1 | C46F4.2.2 | Fatty Acid CoA Synthetase family. | Fatty Acid CoA Synthetase family. | 0.760 |
| acs-4 | arf-3 | F37C12.7.1 | F57H12.1.1 | Fatty Acid CoA Synthetase family. | ADP-ribosylation factor related (20.5 kD) (Arf-3); Belongs to the small GTPase superfamily. Arf family. | 0.404 |
| acs-4 | fasn-1 | F37C12.7.1 | F32H2.5.1 | Fatty Acid CoA Synthetase family. | Carrier domain-containing protein. | 0.941 |
| acs-4 | hsp-3 | F37C12.7.1 | C15H9.6a.5 | Fatty Acid CoA Synthetase family. | Heat shock 70 kDa protein C; Probably plays a role in facilitating the assembly of multimeric protein complexes inside the ER. | 0.412 |
| acs-4 | nmt-1 | F37C12.7.1 | T17E9.2b.1 | Fatty Acid CoA Synthetase family. | Probable glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins. | 0.557 |
| acs-4 | pod-2 | F37C12.7.1 | W09B6.1c.1 | Fatty Acid CoA Synthetase family. | Uncharacterized protein. | 0.617 |
| act-5 | arf-1.2 | T25C8.2.2 | B0336.2.3 | ACTin. | ADP-ribosylation factor 1-like 2; GTP-binding protein involved in protein trafficking; may modulate vesicle budding and uncoating within the Golgi apparatus. Involved in endoplasmic reticulum dynamics during embryogenesis. Also required for adult germline function. Plays a role in cell shedding during embryogenesis probably by promoting the endocytosis of cell adhesion molecules. During neurogenesis, involved in cell autonomous Q.p neuroblast asymmetric divisions that generate one precursor cell and one apoptotic cell, probably by controlling endocytosis. | 0.772 |
| act-5 | eif-2alpha | T25C8.2.2 | Y37E3.10a.1 | ACTin. | S1 motif domain-containing protein. | 0.417 |
| act-5 | hsp-3 | T25C8.2.2 | C15H9.6a.5 | ACTin. | Heat shock 70 kDa protein C; Probably plays a role in facilitating the assembly of multimeric protein complexes inside the ER. | 0.455 |
| act-5 | hsp-4 | T25C8.2.2 | F43E2.8a.2 | ACTin. | Endoplasmic reticulum chaperone BiP homolog; Endoplasmic reticulum chaperone that plays a key role in protein folding and quality control in the endoplasmic reticulum lumen (By similarity). Required for ER dynamics during the first embryonic cell divisions. Specifically, controls ER transition into sheet-like structures at the onset of mitosis, possibly by regulating homotypic membrane fusion. Belongs to the heat shock protein 70 family. | 0.401 |
| act-5 | myo-3 | T25C8.2.2 | K12F2.1.1 | ACTin. | Myosin-3; Essential for muscle contraction. Involved in ovulation likely by regulating the contraction of gonadal myoepithelial sheath cells. Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.843 |
| act-5 | pat-3 | T25C8.2.2 | ZK1058.2.1 | ACTin. | Integrin beta pat-3; Integrin alpha ina-1/beta pat-3 is a receptor for laminin. Integrin alpha pat-2/beta pat-3 recognizes the sequence R-G-D in its ligands (Probable). Plays a role in cell migration, morphogenesis and probably in cell-cell interactions. During gonad morphogenesis, involved in distal tip cell (DTC)-mediated guidance of gonad elongation, in maintaining their sharp tapering morphology and in their migration. Component of an integrin containing attachment complex, which is required for muscle development and maintenance. Involved in the assembly of dense bodies and M line [...] | 0.861 |
| act-5 | pat-4 | T25C8.2.2 | C29F9.7.1 | ACTin. | Integrin-linked protein kinase homolog pat-4; Probable pseudokinase that acts as an adapter protein. Component of an integrin containing attachment complex, which is required for muscle development and maintenance. Involved in the assembly of dense bodies and M lines during body wall muscle development by recruiting several of their components including integrin pat-3, cpna-1, unc-89 and unc- 112 to integrin-mediated attachment sites. Plays a role in distal tip cell (DTC) migration and in oocyte development probably by regulating the actin cytoskeleton. During the formation of neuromus [...] | 0.845 |
| act-5 | pat-6 | T25C8.2.2 | T21D12.4.1 | ACTin. | Paralyzed arrest at two-fold protein 6; Involved in the regulation of cell adhesion and cytoskeleton organization. Component of an integrin containing attachment complex, which is required for muscle development and maintenance. During embryonic development, required to recruit cpna-1, unc-89 and myofilaments to newly forming integrin attachments composed of integrins pat-2/pat-3, pat-4 and unc-112. Also required to reposition the integrin-based attachments so that they form the highly ordered array of dense body and M-line attachments that are characteristic of mature muscle cells. Du [...] | 0.677 |
| act-5 | rab-3 | T25C8.2.2 | C18A3.6a.1 | ACTin. | Ras-related protein Rab-3; Involved in exocytosis by regulating a late step in synaptic vesicle fusion. Could play a role in neurotransmitter release by regulating membrane flow in the nerve terminal (By similarity). Plays a role in the recruitment of endophilin unc-57 to synaptic vesicles. Probably by controlling dense-core vesicle trafficking, plays a role in the AVG neuron-mediated formation of the right axon tract of the ventral nerve cord. Belongs to the small GTPase superfamily. Rab family. | 0.645 |
| act-5 | sid-1 | T25C8.2.2 | C04F5.1.2 | ACTin. | Systemic RNA interference defective protein 1; Plays a role in RNA-mediated gene silencing by acting cell- autonomously as a channel for the transport of double-stranded RNA (dsRNA) between cells. Mediates the spread of dsRNA and subsequent silencing of genes in cells distant from the site of dsRNA introduction. Selective for dsRNA. Preferentially binds long dsRNA, from 50 base pairs up to 700. Short 20 base-pair long molecules are not bound. May also bind dsDNA, but with lower affinity. Binding may be sequence-independent. Belongs to the SID1 family. | 0.440 |
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