Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| C35D10.13 | F35G12.11 | C35D10.13.1 | F35G12.11.2 | Twenty-One u (U) antagoniST. | Enhancer of rudimentary homolog; May have a role in the cell cycle. | 0.980 |
| C35D10.13 | Y23H5A.3 | C35D10.13.1 | Y23H5A.3.1 | Twenty-One u (U) antagoniST. | Uncharacterized protein. | 0.949 |
| C35D10.13 | ife-3 | C35D10.13.1 | B0348.6b.1 | Twenty-One u (U) antagoniST. | Eukaryotic translation initiation factor 4E-3; Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures. All 5 eIF4E proteins bind monomethyl cap structures. Only ife-1, ife-2 and ife-5 bind trimethyl cap structures which result from trans-splicing. Translation of trimethyl cap structure mRNAs may be regulated by intracellular redox state; disulfide bonds change the width and depth of the cap-binding cavity determining selectivit [...] | 0.881 |
| C35D10.13 | tofu-6 | C35D10.13.1 | EEED8.1.2 | Twenty-One u (U) antagoniST. | Embryonic developmental protein tofu-6; Required maternally for early embryonic cell divisions. May have a role in DNA replication. | 0.972 |
| F35G12.11 | C35D10.13 | F35G12.11.2 | C35D10.13.1 | Enhancer of rudimentary homolog; May have a role in the cell cycle. | Twenty-One u (U) antagoniST. | 0.980 |
| F35G12.11 | Y23H5A.3 | F35G12.11.2 | Y23H5A.3.1 | Enhancer of rudimentary homolog; May have a role in the cell cycle. | Uncharacterized protein. | 0.995 |
| F35G12.11 | ife-3 | F35G12.11.2 | B0348.6b.1 | Enhancer of rudimentary homolog; May have a role in the cell cycle. | Eukaryotic translation initiation factor 4E-3; Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures. All 5 eIF4E proteins bind monomethyl cap structures. Only ife-1, ife-2 and ife-5 bind trimethyl cap structures which result from trans-splicing. Translation of trimethyl cap structure mRNAs may be regulated by intracellular redox state; disulfide bonds change the width and depth of the cap-binding cavity determining selectivit [...] | 0.926 |
| F35G12.11 | tofu-6 | F35G12.11.2 | EEED8.1.2 | Enhancer of rudimentary homolog; May have a role in the cell cycle. | Embryonic developmental protein tofu-6; Required maternally for early embryonic cell divisions. May have a role in DNA replication. | 0.950 |
| Y23H5A.3 | C35D10.13 | Y23H5A.3.1 | C35D10.13.1 | Uncharacterized protein. | Twenty-One u (U) antagoniST. | 0.949 |
| Y23H5A.3 | F35G12.11 | Y23H5A.3.1 | F35G12.11.2 | Uncharacterized protein. | Enhancer of rudimentary homolog; May have a role in the cell cycle. | 0.995 |
| Y23H5A.3 | ife-3 | Y23H5A.3.1 | B0348.6b.1 | Uncharacterized protein. | Eukaryotic translation initiation factor 4E-3; Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures. All 5 eIF4E proteins bind monomethyl cap structures. Only ife-1, ife-2 and ife-5 bind trimethyl cap structures which result from trans-splicing. Translation of trimethyl cap structure mRNAs may be regulated by intracellular redox state; disulfide bonds change the width and depth of the cap-binding cavity determining selectivit [...] | 0.935 |
| Y23H5A.3 | tofu-6 | Y23H5A.3.1 | EEED8.1.2 | Uncharacterized protein. | Embryonic developmental protein tofu-6; Required maternally for early embryonic cell divisions. May have a role in DNA replication. | 0.998 |
| cdk-9 | fcp-1 | H25P06.2b.1 | F36F2.6.1 | Probable cyclin-dependent kinase 9; Essential member of the cyclin-dependent kinase pair (CDK9/cyclin-T) complex, also called positive transcription elongation factor B (P-TEFb), which is proposed to facilitate the transition from abortive to production elongation by phosphorylating the CTD (C- terminal domain) of the large subunit of RNA polymerase II (RNAP II) and spt-5. | RNA polymerase II subunit A C-terminal domain phosphatase; During the late stages of oogenesis, dephosphorylates 'Ser-5' of the heptad repeats YSPTSPS in the C-terminal domain of the largest RNA polymerase II subunit ama-1. Similarly, dephosphorylates 'Ser-5' of ama-1 in early embryonic cells prior to the activation of the zygotic transcription program at the 4-cell embryonic stage. May dephosphorylate 'Ser-2' of the ama-1 heptad repeats YSPTSPS in embryonic somatic and germline cells. | 0.789 |
| cdk-9 | spt-5 | H25P06.2b.1 | K08E4.1.2 | Probable cyclin-dependent kinase 9; Essential member of the cyclin-dependent kinase pair (CDK9/cyclin-T) complex, also called positive transcription elongation factor B (P-TEFb), which is proposed to facilitate the transition from abortive to production elongation by phosphorylating the CTD (C- terminal domain) of the large subunit of RNA polymerase II (RNAP II) and spt-5. | Transcription elongation factor SPT5; May function as a component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II. DSIF may enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex. Belongs to the SPT5 family. | 0.987 |
| fcp-1 | cdk-9 | F36F2.6.1 | H25P06.2b.1 | RNA polymerase II subunit A C-terminal domain phosphatase; During the late stages of oogenesis, dephosphorylates 'Ser-5' of the heptad repeats YSPTSPS in the C-terminal domain of the largest RNA polymerase II subunit ama-1. Similarly, dephosphorylates 'Ser-5' of ama-1 in early embryonic cells prior to the activation of the zygotic transcription program at the 4-cell embryonic stage. May dephosphorylate 'Ser-2' of the ama-1 heptad repeats YSPTSPS in embryonic somatic and germline cells. | Probable cyclin-dependent kinase 9; Essential member of the cyclin-dependent kinase pair (CDK9/cyclin-T) complex, also called positive transcription elongation factor B (P-TEFb), which is proposed to facilitate the transition from abortive to production elongation by phosphorylating the CTD (C- terminal domain) of the large subunit of RNA polymerase II (RNAP II) and spt-5. | 0.789 |
| fcp-1 | spt-5 | F36F2.6.1 | K08E4.1.2 | RNA polymerase II subunit A C-terminal domain phosphatase; During the late stages of oogenesis, dephosphorylates 'Ser-5' of the heptad repeats YSPTSPS in the C-terminal domain of the largest RNA polymerase II subunit ama-1. Similarly, dephosphorylates 'Ser-5' of ama-1 in early embryonic cells prior to the activation of the zygotic transcription program at the 4-cell embryonic stage. May dephosphorylate 'Ser-2' of the ama-1 heptad repeats YSPTSPS in embryonic somatic and germline cells. | Transcription elongation factor SPT5; May function as a component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II. DSIF may enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex. Belongs to the SPT5 family. | 0.977 |
| ife-3 | C35D10.13 | B0348.6b.1 | C35D10.13.1 | Eukaryotic translation initiation factor 4E-3; Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures. All 5 eIF4E proteins bind monomethyl cap structures. Only ife-1, ife-2 and ife-5 bind trimethyl cap structures which result from trans-splicing. Translation of trimethyl cap structure mRNAs may be regulated by intracellular redox state; disulfide bonds change the width and depth of the cap-binding cavity determining selectivit [...] | Twenty-One u (U) antagoniST. | 0.881 |
| ife-3 | F35G12.11 | B0348.6b.1 | F35G12.11.2 | Eukaryotic translation initiation factor 4E-3; Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures. All 5 eIF4E proteins bind monomethyl cap structures. Only ife-1, ife-2 and ife-5 bind trimethyl cap structures which result from trans-splicing. Translation of trimethyl cap structure mRNAs may be regulated by intracellular redox state; disulfide bonds change the width and depth of the cap-binding cavity determining selectivit [...] | Enhancer of rudimentary homolog; May have a role in the cell cycle. | 0.926 |
| ife-3 | Y23H5A.3 | B0348.6b.1 | Y23H5A.3.1 | Eukaryotic translation initiation factor 4E-3; Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures. All 5 eIF4E proteins bind monomethyl cap structures. Only ife-1, ife-2 and ife-5 bind trimethyl cap structures which result from trans-splicing. Translation of trimethyl cap structure mRNAs may be regulated by intracellular redox state; disulfide bonds change the width and depth of the cap-binding cavity determining selectivit [...] | Uncharacterized protein. | 0.935 |
| ife-3 | tofu-6 | B0348.6b.1 | EEED8.1.2 | Eukaryotic translation initiation factor 4E-3; Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures. All 5 eIF4E proteins bind monomethyl cap structures. Only ife-1, ife-2 and ife-5 bind trimethyl cap structures which result from trans-splicing. Translation of trimethyl cap structure mRNAs may be regulated by intracellular redox state; disulfide bonds change the width and depth of the cap-binding cavity determining selectivit [...] | Embryonic developmental protein tofu-6; Required maternally for early embryonic cell divisions. May have a role in DNA replication. | 0.969 |
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