Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| C06A5.6 | deps-1 | C06A5.6.1 | Y65B4BL.2a.1 | Uncharacterized protein. | Uncharacterized protein. | 0.561 |
| C06A5.6 | wago-4 | C06A5.6.1 | F58G1.1.1 | Uncharacterized protein. | Argonaute protein wago-4; Argonaute protein which is involved in the endogenous small interfering RNA (endo-siRNA) pathway and is required for RNA-mediated gene silencing (RNAi) in the germline. Interacts with secondary 22G-RNAs, which are RNA-dependent RNA polymerase-derived endo-siRNAs, typically 22 nucleotides in length with a 5'guanosine residue. Also interacts with the mRNA targets of 22G-RNAs. Associates with znfx-1 to mediate small RNA-directed transgenerational epigenetic inheritance of both germline- and soma-expressed genes. Belongs to the argonaute family. WAGO subfamily. | 0.775 |
| Y44E3A.6 | cgh-1 | Y44E3A.6b.1 | C07H6.5.1 | FHA domain-containing protein. | ATP-dependent RNA helicase cgh-1; Probable RNA helicase required for oocyte and sperm function. Also required to prevent the physiological germline apoptosis mechanism killing essentially all developing oocytes. Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily. | 0.967 |
| Y44E3A.6 | dcap-2 | Y44E3A.6b.1 | F52G2.1b.1 | FHA domain-containing protein. | mRNA-decapping enzyme 2; RNA-decapping enzyme although it does not bind cap. May contribute to gene regulation in multiple RNA pathways including monomethylguanosine- and trimethylguanosine-capped RNAs. Belongs to the Nudix hydrolase family. DCP2 subfamily. | 0.989 |
| Y44E3A.6 | ifet-1 | Y44E3A.6b.1 | F56F3.1.1 | FHA domain-containing protein. | Translational repressor ifet-1; Involved in translational repression of multiple mRNAs in the distal gonad. Recruited to the 3' untranslated region (UTR) of zif-1 by oma-1 and is required for translational repression of zif-1. May also be involved in translational repression of mei-1 through recruitment to the mei-1 3' UTR by oma-1. Required for oogenesis but not spermatogenesis, for P granule formation and for the localization of car-1 and cgh-1 to P granules. Required for normal spindle orientation in early embryos. | 0.461 |
| Y44E3A.6 | let-711 | Y44E3A.6b.1 | F57B9.2a.1 | FHA domain-containing protein. | Not1 domain-containing protein. | 0.561 |
| Y44E3A.6 | ntl-3 | Y44E3A.6b.1 | Y56A3A.1a.1 | FHA domain-containing protein. | NOT2_3_5 domain-containing protein. | 0.638 |
| Y44E3A.6 | tag-153 | Y44E3A.6b.1 | F44A2.1b.1 | FHA domain-containing protein. | NOT2_3_5 domain-containing protein. | 0.704 |
| Y51F10.2 | mex-3 | Y51F10.2a.1 | F53G12.5b.1 | RING-type domain-containing protein. | Muscle EXcess. | 0.524 |
| Y51F10.2 | pos-1 | Y51F10.2a.1 | F52E1.1.1 | RING-type domain-containing protein. | Cytoplasmic zinc-finger protein. | 0.663 |
| Y51F10.2 | spn-4 | Y51F10.2a.1 | ZC404.8.2 | RING-type domain-containing protein. | RRM domain-containing protein. | 0.429 |
| cdc-25.3 | gld-3 | ZK637.11.1 | T07F8.3a.1 | M-phase inducer phosphatase cdc-25.3. | Defective in germ line development protein 3; Required maternally for germline survival and embryogenesis. Forms a complex with gls-1 which promotes the oogenic cell fate by freeing the translational repressor fbf to repress sperm promoting factors. Promotes maturation of primary spermatocytes to mature sperm. Required during hermaphrodite development to promote sperm fate, which is critical for determining the normal number of sperm. Promotion of sperm fate is at the expense of oogenesis, possibly through the negative regulation of fbf. Required during male development for the continu [...] | 0.413 |
| cdc-25.3 | mex-3 | ZK637.11.1 | F53G12.5b.1 | M-phase inducer phosphatase cdc-25.3. | Muscle EXcess. | 0.441 |
| cdc-25.3 | neg-1 | ZK637.11.1 | F32D1.6b.1 | M-phase inducer phosphatase cdc-25.3. | Negative Effect on Gut development. | 0.461 |
| cdc-25.3 | pos-1 | ZK637.11.1 | F52E1.1.1 | M-phase inducer phosphatase cdc-25.3. | Cytoplasmic zinc-finger protein. | 0.496 |
| cdc-25.3 | spn-4 | ZK637.11.1 | ZC404.8.2 | M-phase inducer phosphatase cdc-25.3. | RRM domain-containing protein. | 0.733 |
| cgh-1 | Y44E3A.6 | C07H6.5.1 | Y44E3A.6b.1 | ATP-dependent RNA helicase cgh-1; Probable RNA helicase required for oocyte and sperm function. Also required to prevent the physiological germline apoptosis mechanism killing essentially all developing oocytes. Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily. | FHA domain-containing protein. | 0.967 |
| cgh-1 | dcap-2 | C07H6.5.1 | F52G2.1b.1 | ATP-dependent RNA helicase cgh-1; Probable RNA helicase required for oocyte and sperm function. Also required to prevent the physiological germline apoptosis mechanism killing essentially all developing oocytes. Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily. | mRNA-decapping enzyme 2; RNA-decapping enzyme although it does not bind cap. May contribute to gene regulation in multiple RNA pathways including monomethylguanosine- and trimethylguanosine-capped RNAs. Belongs to the Nudix hydrolase family. DCP2 subfamily. | 0.998 |
| cgh-1 | deps-1 | C07H6.5.1 | Y65B4BL.2a.1 | ATP-dependent RNA helicase cgh-1; Probable RNA helicase required for oocyte and sperm function. Also required to prevent the physiological germline apoptosis mechanism killing essentially all developing oocytes. Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily. | Uncharacterized protein. | 0.499 |
| cgh-1 | gld-1 | C07H6.5.1 | T23G11.3.1 | ATP-dependent RNA helicase cgh-1; Probable RNA helicase required for oocyte and sperm function. Also required to prevent the physiological germline apoptosis mechanism killing essentially all developing oocytes. Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily. | Female germline-specific tumor suppressor gld-1; RNA-binding protein which recognizes the 5'-UACUCAU-3' RNA consensus sequence. Binds sequences in both the 5'coding and the 3'-UTR region of rme-2 mRNA. Binds sequences in the 3'-UTR region of cye-1 mRNA. Binds to cyb-2.1, cyb-2.2 and cyb-3 mRNA. Binds sequences in the 3'-UTR region of tra-2 mRNA. Germ line-specific tumor suppressor essential for oogenesis. Controls the spatial pattern of translation of multiple oogenesis specific mRNAs (e.g. yolk receptor rme-2) by repression of translation during early meiotic prophase (leptotene to pa [...] | 0.907 |
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