14 items (Caenorhabditis elegans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	acdh-2	Acyl CoA DeHydrogenase. (386 aa)
	ykt-6	YKT6 (Yeast v-SNARE) homolog; Belongs to the synaptobrevin family. (201 aa)
	acdh-13	Acyl CoA DeHydrogenase. (617 aa)
	acdh-5	Acyl CoA DeHydrogenase. (442 aa)
	acdh-1	Acyl CoA DeHydrogenase. (427 aa)
	acdh-12	Acyl CoA DeHydrogenase. (613 aa)
	acdh-9	Acyl CoA DeHydrogenase. (409 aa)
	sec-22	Yeast SEC homolog; Belongs to the synaptobrevin family. (214 aa)
	acdh-8	Acyl CoA DeHydrogenase. (412 aa)
	acdh-3	Acyl CoA DeHydrogenase. (419 aa)
	acdh-10	Probable medium-chain specific acyl-CoA dehydrogenase 10, mitochondrial; This enzyme is specific for acyl chain lengths of 4 to 16. Belongs to the acyl-CoA dehydrogenase family. (417 aa)
	acdh-4	Acyl CoA DeHydrogenase. (385 aa)
	atg-9	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (921 aa)
	acdh-7	Acyl CoA DeHydrogenase. (412 aa)

Your Current Organism:

Caenorhabditis elegans

NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
acdh-1	acdh-3	C55B7.4a.1	K06A5.6.2	Acyl CoA DeHydrogenase.	Acyl CoA DeHydrogenase.	0.902
acdh-1	acdh-4	C55B7.4a.1	T10E9.9b.1	Acyl CoA DeHydrogenase.	Acyl CoA DeHydrogenase.	0.901
acdh-10	acdh-12	T08G2.3.2	E04F6.5a.2	Probable medium-chain specific acyl-CoA dehydrogenase 10, mitochondrial; This enzyme is specific for acyl chain lengths of 4 to 16. Belongs to the acyl-CoA dehydrogenase family.	Acyl CoA DeHydrogenase.	0.458
acdh-10	acdh-7	T08G2.3.2	T25G12.5.1	Probable medium-chain specific acyl-CoA dehydrogenase 10, mitochondrial; This enzyme is specific for acyl chain lengths of 4 to 16. Belongs to the acyl-CoA dehydrogenase family.	Acyl CoA DeHydrogenase.	0.958
acdh-10	acdh-8	T08G2.3.2	K05F1.3.1	Probable medium-chain specific acyl-CoA dehydrogenase 10, mitochondrial; This enzyme is specific for acyl chain lengths of 4 to 16. Belongs to the acyl-CoA dehydrogenase family.	Acyl CoA DeHydrogenase.	0.901
acdh-12	acdh-10	E04F6.5a.2	T08G2.3.2	Acyl CoA DeHydrogenase.	Probable medium-chain specific acyl-CoA dehydrogenase 10, mitochondrial; This enzyme is specific for acyl chain lengths of 4 to 16. Belongs to the acyl-CoA dehydrogenase family.	0.458
acdh-12	acdh-7	E04F6.5a.2	T25G12.5.1	Acyl CoA DeHydrogenase.	Acyl CoA DeHydrogenase.	0.443
acdh-13	acdh-7	C28C12.9.2	T25G12.5.1	Acyl CoA DeHydrogenase.	Acyl CoA DeHydrogenase.	0.437
acdh-3	acdh-1	K06A5.6.2	C55B7.4a.1	Acyl CoA DeHydrogenase.	Acyl CoA DeHydrogenase.	0.902
acdh-3	acdh-4	K06A5.6.2	T10E9.9b.1	Acyl CoA DeHydrogenase.	Acyl CoA DeHydrogenase.	0.902
acdh-4	acdh-1	T10E9.9b.1	C55B7.4a.1	Acyl CoA DeHydrogenase.	Acyl CoA DeHydrogenase.	0.901
acdh-4	acdh-3	T10E9.9b.1	K06A5.6.2	Acyl CoA DeHydrogenase.	Acyl CoA DeHydrogenase.	0.902
acdh-4	acdh-8	T10E9.9b.1	K05F1.3.1	Acyl CoA DeHydrogenase.	Acyl CoA DeHydrogenase.	0.423
acdh-5	acdh-8	C37A2.3.1	K05F1.3.1	Acyl CoA DeHydrogenase.	Acyl CoA DeHydrogenase.	0.703
acdh-7	acdh-10	T25G12.5.1	T08G2.3.2	Acyl CoA DeHydrogenase.	Probable medium-chain specific acyl-CoA dehydrogenase 10, mitochondrial; This enzyme is specific for acyl chain lengths of 4 to 16. Belongs to the acyl-CoA dehydrogenase family.	0.958
acdh-7	acdh-12	T25G12.5.1	E04F6.5a.2	Acyl CoA DeHydrogenase.	Acyl CoA DeHydrogenase.	0.443
acdh-7	acdh-13	T25G12.5.1	C28C12.9.2	Acyl CoA DeHydrogenase.	Acyl CoA DeHydrogenase.	0.437
acdh-7	acdh-8	T25G12.5.1	K05F1.3.1	Acyl CoA DeHydrogenase.	Acyl CoA DeHydrogenase.	0.901
acdh-8	acdh-10	K05F1.3.1	T08G2.3.2	Acyl CoA DeHydrogenase.	Probable medium-chain specific acyl-CoA dehydrogenase 10, mitochondrial; This enzyme is specific for acyl chain lengths of 4 to 16. Belongs to the acyl-CoA dehydrogenase family.	0.901
acdh-8	acdh-4	K05F1.3.1	T10E9.9b.1	Acyl CoA DeHydrogenase.	Acyl CoA DeHydrogenase.	0.423