STRINGSTRING
atn-1 atn-1 C50C3.2 C50C3.2 dys-1 dys-1 F21C10.7 F21C10.7 unc-73 unc-73 spc-1 spc-1 unc-70 unc-70 sma-1 sma-1 vab-10 vab-10
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
atn-1AcTiniN. (920 aa)
C50C3.2Uncharacterized protein C50C3.2; Belongs to the spectrin family. (2236 aa)
dys-1Dystrophin-1; Plays a role in cholinergic transmission and as a functional partner of dystrobrevin (dyb-1), necessary for muscle maintenance. Required for neuronal positioning. (3674 aa)
F21C10.7Uncharacterized protein. (2588 aa)
unc-73Guanine nucleotide exchange factor UNC-73A. (2488 aa)
spc-1SPeCtrin. (2432 aa)
unc-70Spectrin beta chain; Belongs to the spectrin family. (2326 aa)
sma-1SMAll. (4166 aa)
vab-10GAR domain-containing protein. (5059 aa)
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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