(41 nodes) Cytosolic large ribosomal subunit network (Brugia malayi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	bma-rpl-10.2	Bm13774, isoform a. (214 aa)
	rpp-2	60S acidic ribosomal protein P2; Plays an important role in the elongation step of protein synthesis. (114 aa)
	bma-rpl-36	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (102 aa)
	Bm1_05715	Uncharacterized protein. (138 aa)
	Bm1_57375	BMA-RPL-9. (99 aa)
	A0A5S6PFU2	60S ribosomal protein L29. (62 aa)
	A0A5S6PCJ3	Uncharacterized protein. (148 aa)
	Bma-rpl-9	BMA-RPL-9. (188 aa)
	bma-rpl-13	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (212 aa)
	Bm1_16165	Bm9239, isoform b. (265 aa)
	Bma-rpl-18	BMA-RPL-18, isoform a. (188 aa)
	bma-rpl-24.1	BMA-RPL-24.1. (160 aa)
	Bma-rpl-2	BMA-RPL-2, isoform e. (260 aa)
	bma-rpl-12	BMA-RPL-12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	Bm1_13895	BMA-RPL-3, isoform c; Belongs to the universal ribosomal protein uL3 family. (430 aa)
	Bma-rpl-27	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
	Bm1_23420	Bm9353. (228 aa)
	Bma-rla-2	BMA-RLA-2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (118 aa)
	bma-rpl-17	BMA-RPL-17; Belongs to the universal ribosomal protein uL22 family. (186 aa)
	Bm1_21735	Bm6341. (265 aa)
	Bm1_51345	Bm4311. (459 aa)
	bma-rpl-33.1	Bm3270. (124 aa)
	bma-rpl-21	Bm2198, isoform a; Bm2198, isoform b. (160 aa)
	bma-rpl-38	BMA-RPL-38; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
	Bm14068	60S acidic ribosomal protein P2; Bm14068; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
	Bm1_04910	Bm13898; Belongs to the universal ribosomal protein uL15 family. (147 aa)
	bma-rla-0	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (320 aa)
	Bm1_04440	Bm13718; Belongs to the universal ribosomal protein uL5 family. (195 aa)
	bma-rpl-1	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (216 aa)
	Bm1_15745	Ribosomal protein L37; Binds to the 23S rRNA. (101 aa)
	bma-rpl-43	BMA-RPL-43. (106 aa)
	bma-rpl-33.2	Bm408. (123 aa)
	Bm1_04800	Bm4425, isoform b; Belongs to the universal ribosomal protein uL23 family. (164 aa)
	Bma-pqn-24	BMA-PQN-24. (104 aa)
	bma-rpl-31	Bm6250, isoform a. (128 aa)
	bma-rpl-5	BMA-RPL-5. (295 aa)
	bma-rpl-7	BMA-RPL-7. (249 aa)
	bma-rpl-20	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (180 aa)
	bma-rpl-19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (209 aa)
	bma-rpl-32	BMA-RPL-32, isoform a. (134 aa)
	bma-rla-1	BMA-RLA-1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (117 aa)

Your Current Organism:

Brugia malayi

NCBI taxonomy Id: 6279
Other names: B. malayi, agent of lymphatic filariasis

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A5S6PCJ3	A0A5S6PFU2	A0A5S6PCJ3	A0A5S6PFU2	Uncharacterized protein.	60S ribosomal protein L29.	0.982
A0A5S6PCJ3	Bm14068	A0A5S6PCJ3	A0A0K0J056	Uncharacterized protein.	60S acidic ribosomal protein P2; Bm14068; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.845
A0A5S6PCJ3	Bm1_04440	A0A5S6PCJ3	A0A0J9Y7T7	Uncharacterized protein.	Bm13718; Belongs to the universal ribosomal protein uL5 family.	0.976
A0A5S6PCJ3	Bm1_04800	A0A5S6PCJ3	A0A0J9XPG8	Uncharacterized protein.	Bm4425, isoform b; Belongs to the universal ribosomal protein uL23 family.	0.984
A0A5S6PCJ3	Bm1_04910	A0A5S6PCJ3	A0A0K0IZF4	Uncharacterized protein.	Bm13898; Belongs to the universal ribosomal protein uL15 family.	0.978
A0A5S6PCJ3	Bm1_05715	A0A5S6PCJ3	A0A5S6PQA0	Uncharacterized protein.	Uncharacterized protein.	0.977
A0A5S6PCJ3	Bm1_13895	A0A5S6PCJ3	A0A158PYZ0	Uncharacterized protein.	BMA-RPL-3, isoform c; Belongs to the universal ribosomal protein uL3 family.	0.981
A0A5S6PCJ3	Bm1_15745	A0A5S6PCJ3	A0A0J9XYB5	Uncharacterized protein.	Ribosomal protein L37; Binds to the 23S rRNA.	0.970
A0A5S6PCJ3	Bm1_23420	A0A5S6PCJ3	A0A0K0JYZ7	Uncharacterized protein.	Bm9353.	0.917
A0A5S6PCJ3	Bm1_51345	A0A5S6PCJ3	A0A0K0JE32	Uncharacterized protein.	Bm4311.	0.794
A0A5S6PCJ3	Bm1_57375	A0A5S6PCJ3	A0A5S6PPW1	Uncharacterized protein.	BMA-RPL-9.	0.920
A0A5S6PCJ3	Bma-pqn-24	A0A5S6PCJ3	A0A0I9NB15	Uncharacterized protein.	BMA-PQN-24.	0.845
A0A5S6PCJ3	Bma-rla-2	A0A5S6PCJ3	A0A0K0JQB1	Uncharacterized protein.	BMA-RLA-2; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.845
A0A5S6PCJ3	Bma-rpl-18	A0A5S6PCJ3	A0A1P6C980	Uncharacterized protein.	BMA-RPL-18, isoform a.	0.975
A0A5S6PCJ3	Bma-rpl-2	A0A5S6PCJ3	A0A1I9G6N5	Uncharacterized protein.	BMA-RPL-2, isoform e.	0.975
A0A5S6PCJ3	Bma-rpl-27	A0A5S6PCJ3	A0A0R3RE27	Uncharacterized protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.983
A0A5S6PCJ3	Bma-rpl-9	A0A5S6PCJ3	A0A1U7F457	Uncharacterized protein.	BMA-RPL-9.	0.920
A0A5S6PCJ3	bma-rla-0	A0A5S6PCJ3	A0A0K0IYX6	Uncharacterized protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.982
A0A5S6PCJ3	bma-rla-1	A0A5S6PCJ3	A0A0H5S275	Uncharacterized protein.	BMA-RLA-1; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.980
A0A5S6PCJ3	bma-rpl-1	A0A5S6PCJ3	A0A0J9Y0D6	Uncharacterized protein.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.977