41 items (Brugia malayi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A5S6PY61	Uncharacterized protein. (614 aa)
	A0A5S6PXZ5	Uncharacterized protein. (607 aa)
	A0A5S6PJI3	Uncharacterized protein. (288 aa)
	A0A5S6PJD8	Uncharacterized protein. (345 aa)
	A0A5S6PDZ3	Uncharacterized protein. (672 aa)
	Bm1_54210	Uncharacterized protein. (128 aa)
	A0A5S6P8D4	Bm10947. (1128 aa)
	A0A5S6P8B5	Bm10947. (1127 aa)
	Bma-mpz-2	BMA-MPZ-2. (95 aa)
	Bm1_35755	Bm7284, isoform d; Bm7284, isoform d; Bm9456; Bm9456. (104 aa)
	Bm1_10755	Bm8219. (868 aa)
	Bma-ssl-1	BMA-SSL-1, isoform u. (2575 aa)
	Bma-jun-1	BMA-JUN-1, isoform a; BMA-JUN-1, isoform f. (366 aa)
	Bm4113	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	Bma-ubq-1	BMA-UBQ-1, isoform a; BMA-UBQ-1, isoform e. (372 aa)
	Bma-jnk-1	Mitogen-activated protein kinase. (524 aa)
	Bm1_52825	BMA-SPAT-3, isoform b. (491 aa)
	Bm1_54585	BMA-SEK-3; Belongs to the protein kinase superfamily. (362 aa)
	Bm8720	Histone H2B; Belongs to the histone H2B family. (132 aa)
	Bm1_27510	Bm8019. (537 aa)
	Bm5776	Bm5776. (520 aa)
	Bma-cki-1	BMA-CKI-1. (204 aa)
	bma-htz-1	Histone H2A; Belongs to the histone H2A family. (136 aa)
	bma-hira-1	Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (909 aa)
	Bm1_40385	Bm4003. (561 aa)
	Bm2874	Histone H2B; Belongs to the histone H2B family. (224 aa)
	bma-mes-6	BMA-MES-6, isoform b; BMA-MES-6, isoform c. (317 aa)
	Bm1_25835	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (383 aa)
	Bma-lin-53	BMA-LIN-53. (418 aa)
	bma-sek-1	BMA-SEK-1, isoform a; Belongs to the protein kinase superfamily. (382 aa)
	bma-apc-11.2	Bm12903. (131 aa)
	bma-mig-38	BMA-MIG-38. (1332 aa)
	bma-mes-2	BMA-MES-2, isoform b. (685 aa)
	Bm1_52550	Bm6670. (213 aa)
	Bma-his-56	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	bma-mpk-1	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (385 aa)
	bma-mig-15	BMA-MIG-15, isoform a; BMA-MIG-15, isoform b. (1176 aa)
	Bm1_22945	Bm9012. (699 aa)
	bma-mre-11	BMA-MRE-11; Belongs to the MRE11/RAD32 family. (553 aa)
	bma-cya-1	BMA-CYA-1; Belongs to the cyclin family. (527 aa)
	A0A5S6PRV0	Bm6268, isoform e. (497 aa)

Your Current Organism:

Brugia malayi

NCBI taxonomy Id: 6279
Other names: B. malayi, agent of lymphatic filariasis

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A5S6P8B5	Bm1_22945	A0A5S6P8B5	A0A0H5S363	Bm10947.	Bm9012.	0.648
A0A5S6P8B5	Bm1_52825	A0A5S6P8B5	A0A1P6BFJ5	Bm10947.	BMA-SPAT-3, isoform b.	0.537
A0A5S6P8B5	Bm1_54210	A0A5S6P8B5	A0A5S6PA72	Bm10947.	Uncharacterized protein.	0.418
A0A5S6P8B5	Bm2874	A0A5S6P8B5	A0A0K0J7V2	Bm10947.	Histone H2B; Belongs to the histone H2B family.	0.574
A0A5S6P8B5	Bm4113	A0A5S6P8B5	A0A1P6C045	Bm10947.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.513
A0A5S6P8B5	Bm5776	A0A5S6P8B5	A0A0K0JKB0	Bm10947.	Bm5776.	0.537
A0A5S6P8B5	Bm8720	A0A5S6P8B5	A0A0K0JWT3	Bm10947.	Histone H2B; Belongs to the histone H2B family.	0.574
A0A5S6P8B5	Bma-his-56	A0A5S6P8B5	A0A0J9XPK9	Bm10947.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.513
A0A5S6P8B5	Bma-lin-53	A0A5S6P8B5	A0A0K0IYK4	Bm10947.	BMA-LIN-53.	0.968
A0A5S6P8B5	bma-htz-1	A0A5S6P8B5	A0A0K0JIB9	Bm10947.	Histone H2A; Belongs to the histone H2A family.	0.467
A0A5S6P8B5	bma-mes-2	A0A5S6P8B5	A0A0J9Y002	Bm10947.	BMA-MES-2, isoform b.	0.970
A0A5S6P8B5	bma-mes-6	A0A5S6P8B5	A0A0K0J4H3	Bm10947.	BMA-MES-6, isoform b; BMA-MES-6, isoform c.	0.971
A0A5S6P8D4	Bm1_22945	A0A5S6P8D4	A0A0H5S363	Bm10947.	Bm9012.	0.648
A0A5S6P8D4	Bm1_52825	A0A5S6P8D4	A0A1P6BFJ5	Bm10947.	BMA-SPAT-3, isoform b.	0.537
A0A5S6P8D4	Bm1_54210	A0A5S6P8D4	A0A5S6PA72	Bm10947.	Uncharacterized protein.	0.418
A0A5S6P8D4	Bm2874	A0A5S6P8D4	A0A0K0J7V2	Bm10947.	Histone H2B; Belongs to the histone H2B family.	0.574
A0A5S6P8D4	Bm4113	A0A5S6P8D4	A0A1P6C045	Bm10947.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.513
A0A5S6P8D4	Bm5776	A0A5S6P8D4	A0A0K0JKB0	Bm10947.	Bm5776.	0.537
A0A5S6P8D4	Bm8720	A0A5S6P8D4	A0A0K0JWT3	Bm10947.	Histone H2B; Belongs to the histone H2B family.	0.574
A0A5S6P8D4	Bma-his-56	A0A5S6P8D4	A0A0J9XPK9	Bm10947.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.513