19 items (Brugia malayi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Bma-tag-335	BMA-TAG-335. (359 aa)
	bma-hxk-1.1	Phosphotransferase. (450 aa)
	Bm1_53060	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (320 aa)
	Bm6539	Bm6539; Belongs to the phosphohexose mutase family. (586 aa)
	Bm1_38705	Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions. (179 aa)
	Bm1_52850	Bm1963. (473 aa)
	Bm1_55785	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (347 aa)
	Bma-chs-1	BMA-CHS-1. (1321 aa)
	Bm13954	Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, a sugar nucleotide critical to multiple glycosylation pathways including protein N- and O- glycosylation; Belongs to the phosphohexose mutase family. (543 aa)
	Bm13963	UTP--glucose-1-phosphate uridylyltransferase. (499 aa)
	Bm1951	Bm1951, isoform a; Bm1951, isoform b; Belongs to the glycosyl hydrolase 18 family. (343 aa)
	Bm6330	Bm6330, isoform a; Belongs to the glycosyl hydrolase 18 family. (377 aa)
	Bma-ger-1	BMA-GER-1. (320 aa)
	Bm2622	Bm2622. (466 aa)
	Bm1_15740	Bm13746, isoform a. (571 aa)
	Bm1_49695	Uncharacterized protein. (438 aa)
	A0A5S6PKC0	Uncharacterized protein. (232 aa)
	A0A5S6PKR2	UDP-glucose 6-dehydrogenase. (473 aa)
	Bm1_26075	Uncharacterized protein. (521 aa)

Your Current Organism:

Brugia malayi

NCBI taxonomy Id: 6279
Other names: B. malayi, agent of lymphatic filariasis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A5S6PKC0	Bm13954	A0A5S6PKC0	A0A1P6BM06	Uncharacterized protein.	Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, a sugar nucleotide critical to multiple glycosylation pathways including protein N- and O- glycosylation; Belongs to the phosphohexose mutase family.	0.461
A0A5S6PKC0	Bm1_15740	A0A5S6PKC0	A0A5S6PAF8	Uncharacterized protein.	Bm13746, isoform a.	0.949
A0A5S6PKC0	Bm1_38705	A0A5S6PKC0	A0A0K0J000	Uncharacterized protein.	Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.	0.933
A0A5S6PKC0	Bm1_52850	A0A5S6PKC0	A0A0K0J3Y0	Uncharacterized protein.	Bm1963.	0.919
A0A5S6PKC0	Bm6539	A0A5S6PKC0	A0A0J9YAB6	Uncharacterized protein.	Bm6539; Belongs to the phosphohexose mutase family.	0.940
A0A5S6PKC0	bma-hxk-1.1	A0A5S6PKC0	A0A0I9N7U3	Uncharacterized protein.	Phosphotransferase.	0.904
A0A5S6PKR2	Bm13954	A0A5S6PKR2	A0A1P6BM06	UDP-glucose 6-dehydrogenase.	Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, a sugar nucleotide critical to multiple glycosylation pathways including protein N- and O- glycosylation; Belongs to the phosphohexose mutase family.	0.407
A0A5S6PKR2	Bm13963	A0A5S6PKR2	A0A1P6BMH5	UDP-glucose 6-dehydrogenase.	UTP--glucose-1-phosphate uridylyltransferase.	0.946
A0A5S6PKR2	Bm1_15740	A0A5S6PKR2	A0A5S6PAF8	UDP-glucose 6-dehydrogenase.	Bm13746, isoform a.	0.463
A0A5S6PKR2	Bm1_49695	A0A5S6PKR2	A0A5S6PFT6	UDP-glucose 6-dehydrogenase.	Uncharacterized protein.	0.996
A0A5S6PKR2	Bm1_52850	A0A5S6PKR2	A0A0K0J3Y0	UDP-glucose 6-dehydrogenase.	Bm1963.	0.456
A0A5S6PKR2	Bm1_55785	A0A5S6PKR2	A0A0K0J7J5	UDP-glucose 6-dehydrogenase.	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.962
A0A5S6PKR2	Bm2622	A0A5S6PKR2	A0A1U7F472	UDP-glucose 6-dehydrogenase.	Bm2622.	0.543
A0A5S6PKR2	Bm6539	A0A5S6PKR2	A0A0J9YAB6	UDP-glucose 6-dehydrogenase.	Bm6539; Belongs to the phosphohexose mutase family.	0.400
A0A5S6PKR2	Bma-chs-1	A0A5S6PKR2	A0A0K0JLB7	UDP-glucose 6-dehydrogenase.	BMA-CHS-1.	0.597
A0A5S6PKR2	Bma-ger-1	A0A5S6PKR2	A0A1U7F0D2	UDP-glucose 6-dehydrogenase.	BMA-GER-1.	0.666
A0A5S6PKR2	Bma-tag-335	A0A5S6PKR2	A0A0H5SR59	UDP-glucose 6-dehydrogenase.	BMA-TAG-335.	0.451
Bm13954	A0A5S6PKC0	A0A1P6BM06	A0A5S6PKC0	Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, a sugar nucleotide critical to multiple glycosylation pathways including protein N- and O- glycosylation; Belongs to the phosphohexose mutase family.	Uncharacterized protein.	0.461
Bm13954	A0A5S6PKR2	A0A1P6BM06	A0A5S6PKR2	Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, a sugar nucleotide critical to multiple glycosylation pathways including protein N- and O- glycosylation; Belongs to the phosphohexose mutase family.	UDP-glucose 6-dehydrogenase.	0.407
Bm13954	Bm13963	A0A1P6BM06	A0A1P6BMH5	Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, a sugar nucleotide critical to multiple glycosylation pathways including protein N- and O- glycosylation; Belongs to the phosphohexose mutase family.	UTP--glucose-1-phosphate uridylyltransferase.	0.807