28 items (Brugia malayi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Bm6873	Bm6873. (568 aa)
	bma-rde-1	BMA-RDE-1; Belongs to the argonaute family. (930 aa)
	Bma-gpa-12	BMA-GPA-12. (361 aa)
	Bm1_24405	Bm1969. (506 aa)
	bma-aak-2	Non-specific serine/threonine protein kinase. (566 aa)
	bma-pmk-3	BMA-PMK-3, isoform c. (293 aa)
	Bm1_27290	Bm6727. (192 aa)
	bma-rho-1.1	Bm10155. (191 aa)
	Bm1_31785	Mitogen-activated protein kinase. (369 aa)
	bma-dgk-1	Diacylglycerol kinase. (972 aa)
	Bm2115	Bm2115. (192 aa)
	bma-mig-2	BMA-MIG-2. (195 aa)
	Bma-gpa-3	BMA-GPA-3. (355 aa)
	Bm3148	Bm3148, isoform b. (1635 aa)
	Bm1_13960	Bm4213; Belongs to the argonaute family. (996 aa)
	bma-svh-2	BMA-SVH-2, isoform a; BMA-SVH-2, isoform c; Belongs to the protein kinase superfamily. Tyr protein kinase family. (911 aa)
	Bm1_54585	BMA-SEK-3; Belongs to the protein kinase superfamily. (362 aa)
	bma-rho-1.2	Bm9534. (192 aa)
	Bma-egl-8	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. (1265 aa)
	Bm1864	Bm1864, isoform c; Bm1864, isoform e. (3992 aa)
	Bma-ets-4	BMA-ETS-4, isoform c; BMA-ETS-4, isoform d. (550 aa)
	bma-spe-4	BMA-SPE-4, isoform b. (424 aa)
	A0A5S6PGS2	Bm2158, isoform e. (931 aa)
	Bm1_39550	Voltage-dependent L-type calcium channel subunit alpha. (1886 aa)
	A0A5S6PLD1	Uncharacterized protein. (1427 aa)
	A0A5S6PLQ2	Uncharacterized protein. (606 aa)
	Bm1_36650	Bm5630. (733 aa)
	Bm1_06230	Uncharacterized protein. (1336 aa)

Your Current Organism:

Brugia malayi

NCBI taxonomy Id: 6279
Other names: B. malayi, agent of lymphatic filariasis

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A5S6PGS2	Bm1_13960	A0A5S6PGS2	A0A0K0JDP1	Bm2158, isoform e.	Bm4213; Belongs to the argonaute family.	0.929
A0A5S6PGS2	Bm1_36650	A0A5S6PGS2	A0A5S6PQX1	Bm2158, isoform e.	Bm5630.	0.426
A0A5S6PGS2	bma-rde-1	A0A5S6PGS2	A0A0H5S7K5	Bm2158, isoform e.	BMA-RDE-1; Belongs to the argonaute family.	0.927
A0A5S6PLD1	A0A5S6PLQ2	A0A5S6PLD1	A0A5S6PLQ2	Uncharacterized protein.	Uncharacterized protein.	0.732
A0A5S6PLD1	Bm1_06230	A0A5S6PLD1	A0A5S6PUX2	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A5S6PLD1	Bm1_27290	A0A5S6PLD1	A0A0J9XXE8	Uncharacterized protein.	Bm6727.	0.426
A0A5S6PLD1	bma-mig-2	A0A5S6PLD1	A0A0K0J6Q6	Uncharacterized protein.	BMA-MIG-2.	0.402
A0A5S6PLD1	bma-rho-1.1	A0A5S6PLD1	A0A0K0IM87	Uncharacterized protein.	Bm10155.	0.426
A0A5S6PLD1	bma-rho-1.2	A0A5S6PLD1	A0A0K0JZL9	Uncharacterized protein.	Bm9534.	0.426
A0A5S6PLQ2	A0A5S6PLD1	A0A5S6PLQ2	A0A5S6PLD1	Uncharacterized protein.	Uncharacterized protein.	0.732
A0A5S6PLQ2	Bm1_06230	A0A5S6PLQ2	A0A5S6PUX2	Uncharacterized protein.	Uncharacterized protein.	0.654
A0A5S6PLQ2	bma-mig-2	A0A5S6PLQ2	A0A0K0J6Q6	Uncharacterized protein.	BMA-MIG-2.	0.475
Bm1_06230	A0A5S6PLD1	A0A5S6PUX2	A0A5S6PLD1	Uncharacterized protein.	Uncharacterized protein.	0.999
Bm1_06230	A0A5S6PLQ2	A0A5S6PUX2	A0A5S6PLQ2	Uncharacterized protein.	Uncharacterized protein.	0.654
Bm1_13960	A0A5S6PGS2	A0A0K0JDP1	A0A5S6PGS2	Bm4213; Belongs to the argonaute family.	Bm2158, isoform e.	0.929
Bm1_13960	bma-rde-1	A0A0K0JDP1	A0A0H5S7K5	Bm4213; Belongs to the argonaute family.	BMA-RDE-1; Belongs to the argonaute family.	0.913
Bm1_27290	A0A5S6PLD1	A0A0J9XXE8	A0A5S6PLD1	Bm6727.	Uncharacterized protein.	0.426
Bm1_27290	Bm1_31785	A0A0J9XXE8	A0A0K0J2R4	Bm6727.	Mitogen-activated protein kinase.	0.474
Bm1_27290	Bm2115	A0A0J9XXE8	A0A0K0J4I3	Bm6727.	Bm2115.	0.583
Bm1_27290	Bma-gpa-12	A0A0J9XXE8	A0A0H5SBA3	Bm6727.	BMA-GPA-12.	0.534