47 items (Brugia pahangi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0N4U069	Uncharacterized protein. (180 aa)
	A0A0N4TR96	Uncharacterized protein. (485 aa)
	A0A0N4U098	Uncharacterized protein. (133 aa)
	BPAG_LOCUS845	Uncharacterized protein. (795 aa)
	BPAG_LOCUS9475	Uncharacterized protein. (454 aa)
	BPAG_LOCUS9656	CULLIN_2 domain-containing protein; Belongs to the cullin family. (896 aa)
	A0A158PRL5	CULLIN_2 domain-containing protein; Belongs to the cullin family. (828 aa)
	A0A158PSV1	Uncharacterized protein. (183 aa)
	BPAG_LOCUS9981	Uncharacterized protein. (758 aa)
	A0A0N4TYE2	Uncharacterized protein. (627 aa)
	A0A0N4TXS0	F-box domain-containing protein. (617 aa)
	A0A0N4TXG4	F-box domain-containing protein. (576 aa)
	A0A0N4TWQ3	CULLIN_2 domain-containing protein; Belongs to the cullin family. (815 aa)
	A0A0N4TWD7	F-box domain-containing protein. (495 aa)
	BPAG_LOCUS208	F-box domain-containing protein. (453 aa)
	BPAG_LOCUS1525	Uncharacterized protein; Belongs to the SKP1 family. (168 aa)
	BPAG_LOCUS1840	FBA domain-containing protein. (354 aa)
	BPAG_LOCUS1945	CULLIN_2 domain-containing protein; Belongs to the cullin family. (759 aa)
	BPAG_LOCUS2036	F-box domain-containing protein. (659 aa)
	BPAG_LOCUS2728	Uncharacterized protein. (143 aa)
	BPAG_LOCUS2746	Uncharacterized protein. (219 aa)
	BPAG_LOCUS2849	F-box domain-containing protein. (575 aa)
	BPAG_LOCUS3469	F-box domain-containing protein. (360 aa)
	BPAG_LOCUS3490	Uncharacterized protein. (149 aa)
	A0A0N4T922	F-box domain-containing protein. (172 aa)
	BPAG_LOCUS4725	Uncharacterized protein. (307 aa)
	BPAG_LOCUS4744	Uncharacterized protein. (859 aa)
	BPAG_LOCUS4919	F-box domain-containing protein. (120 aa)
	BPAG_LOCUS4965	Uncharacterized protein. (87 aa)
	BPAG_LOCUS4980	Uncharacterized protein. (68 aa)
	BPAG_LOCUS6411	Uncharacterized protein. (89 aa)
	BPAG_LOCUS6568	Uncharacterized protein. (62 aa)
	BPAG_LOCUS6684	Uncharacterized protein. (149 aa)
	BPAG_LOCUS6731	Uncharacterized protein. (82 aa)
	BPAG_LOCUS7455	Uncharacterized protein. (87 aa)
	BPAG_LOCUS7554	Uncharacterized protein. (246 aa)
	BPAG_LOCUS7614	Uncharacterized protein. (122 aa)
	A0A0N4THH9	Uncharacterized protein. (133 aa)
	BPAG_LOCUS7707	Uncharacterized protein. (99 aa)
	A0A0N4TVW3	FBA domain-containing protein. (321 aa)
	A0A0N4TVJ6	F-box domain-containing protein. (571 aa)
	A0A0N4TUQ0	F-box domain-containing protein. (511 aa)
	A0A0N4TTN2	Uncharacterized protein. (444 aa)
	A0A0N4TT93	Uncharacterized protein. (105 aa)
	A0A0N4TT64	F-box domain-containing protein. (553 aa)
	A0A0N4TSD3	F-box domain-containing protein. (528 aa)
	A0A0N4TRS7	Uncharacterized protein; Belongs to the SKP1 family. (141 aa)

Your Current Organism:

Brugia pahangi

NCBI taxonomy Id: 6280
Other names: B. pahangi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0N4T922	A0A0N4TR96	A0A0N4T922	A0A0N4TR96	F-box domain-containing protein.	Uncharacterized protein.	0.410
A0A0N4T922	A0A0N4TRS7	A0A0N4T922	A0A0N4TRS7	F-box domain-containing protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.804
A0A0N4T922	A0A0N4TWQ3	A0A0N4T922	A0A0N4TWQ3	F-box domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.809
A0A0N4T922	A0A0N4U069	A0A0N4T922	A0A0N4U069	F-box domain-containing protein.	Uncharacterized protein.	0.455
A0A0N4T922	A0A0N4U098	A0A0N4T922	A0A0N4U098	F-box domain-containing protein.	Uncharacterized protein.	0.900
A0A0N4T922	A0A158PRL5	A0A0N4T922	A0A158PRL5	F-box domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.606
A0A0N4T922	BPAG_LOCUS1525	A0A0N4T922	A0A0N4T0A7	F-box domain-containing protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.804
A0A0N4T922	BPAG_LOCUS9981	A0A0N4T922	A0A0N4TNF6	F-box domain-containing protein.	Uncharacterized protein.	0.804
A0A0N4THH9	A0A0N4TWQ3	A0A0N4THH9	A0A0N4TWQ3	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.618
A0A0N4THH9	BPAG_LOCUS2728	A0A0N4THH9	A0A0N4T3H8	Uncharacterized protein.	Uncharacterized protein.	0.485
A0A0N4TR96	A0A0N4T922	A0A0N4TR96	A0A0N4T922	Uncharacterized protein.	F-box domain-containing protein.	0.410
A0A0N4TR96	A0A0N4TRS7	A0A0N4TR96	A0A0N4TRS7	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.978
A0A0N4TR96	A0A0N4TSD3	A0A0N4TR96	A0A0N4TSD3	Uncharacterized protein.	F-box domain-containing protein.	0.412
A0A0N4TR96	A0A0N4TT93	A0A0N4TR96	A0A0N4TT93	Uncharacterized protein.	Uncharacterized protein.	0.442
A0A0N4TR96	A0A0N4TUQ0	A0A0N4TR96	A0A0N4TUQ0	Uncharacterized protein.	F-box domain-containing protein.	0.442
A0A0N4TR96	A0A0N4TWQ3	A0A0N4TR96	A0A0N4TWQ3	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.979
A0A0N4TR96	A0A0N4TXG4	A0A0N4TR96	A0A0N4TXG4	Uncharacterized protein.	F-box domain-containing protein.	0.442
A0A0N4TR96	A0A0N4TXS0	A0A0N4TR96	A0A0N4TXS0	Uncharacterized protein.	F-box domain-containing protein.	0.442
A0A0N4TR96	A0A0N4U069	A0A0N4TR96	A0A0N4U069	Uncharacterized protein.	Uncharacterized protein.	0.410
A0A0N4TR96	A0A0N4U098	A0A0N4TR96	A0A0N4U098	Uncharacterized protein.	Uncharacterized protein.	0.410