(32 nodes) Nuclear Envelope Breakdown network (Trema orientale)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2P5A7B4	Nuclear pore protein. (863 aa)
	A0A2P5ADH6	Uncharacterized protein. (290 aa)
	TorNUP85	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (719 aa)
	A0A2P5AWN8	Uncharacterized protein. (78 aa)
	A0A2P5C4K1	Zinc finger, C2H2 domain containing protein. (438 aa)
	A0A2P5CD03	Talin. (444 aa)
	A0A2P5D2U7	Talin. (448 aa)
	A0A2P5DAB6	WPP domain containing protein. (78 aa)
	A0A2P5DMY5	GLE1-like. (676 aa)
	A0A2P5E215	Nucleoprotein TPR/MLP. (2035 aa)
	A0A2P5E5Q4	Nucleoporin. (623 aa)
	A0A2P5E617	Coatomer beta subunit. (330 aa)
	A0A2P5E674	Peptidase. (1128 aa)
	A0A2P5E8D0	Nucleoporin, Nup155-like. (1259 aa)
	TorNENA	WD repeat protein 35; Belongs to the WD repeat SEC13 family. (317 aa)
	A0A2P5EAK1	Uncharacterized protein. (1354 aa)
	A0A2P5EAY7	GRIP. (808 aa)
	A0A2P5EBD7	Nucleoporin. (414 aa)
	A0A2P5ED35	Uncharacterized protein. (1791 aa)
	A0A2P5EJ61	Nucleoporin. (275 aa)
	A0A2P5EM51	Nucleoporin. (804 aa)
	A0A2P5ESQ6	Nuclear pore complex protein NUP35. (332 aa)
	A0A2P5ETW9	Nucleoporin. (874 aa)
	A0A2P5ETY6	Nucleoporin. (1003 aa)
	A0A2P5EW78	WD repeat containing protein. (426 aa)
	A0A2P5F2F9	Nucleoporin. (185 aa)
	A0A2P5F327	Talin. (151 aa)
	A0A2P5F5G8	Peptidase S59, nucleoporin. (998 aa)
	A0A2P5F6R1	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1087 aa)
	A0A2P5FUS1	Coatomer beta subunit. (349 aa)
	A0A2P5FZV1	Uncharacterized protein. (252 aa)
	A0A2P5G284	Guanine nucleotide-binding protein, beta subunit. (1511 aa)

Your Current Organism:

Trema orientale

NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2P5A7B4	A0A2P5ADH6	A0A2P5A7B4	A0A2P5ADH6	Nuclear pore protein.	Uncharacterized protein.	0.998
A0A2P5A7B4	A0A2P5AWN8	A0A2P5A7B4	A0A2P5AWN8	Nuclear pore protein.	Uncharacterized protein.	0.891
A0A2P5A7B4	A0A2P5C4K1	A0A2P5A7B4	A0A2P5C4K1	Nuclear pore protein.	Zinc finger, C2H2 domain containing protein.	0.999
A0A2P5A7B4	A0A2P5CD03	A0A2P5A7B4	A0A2P5CD03	Nuclear pore protein.	Talin.	0.955
A0A2P5A7B4	A0A2P5D2U7	A0A2P5A7B4	A0A2P5D2U7	Nuclear pore protein.	Talin.	0.992
A0A2P5A7B4	A0A2P5DAB6	A0A2P5A7B4	A0A2P5DAB6	Nuclear pore protein.	WPP domain containing protein.	0.787
A0A2P5A7B4	A0A2P5DMY5	A0A2P5A7B4	A0A2P5DMY5	Nuclear pore protein.	GLE1-like.	0.939
A0A2P5A7B4	A0A2P5E215	A0A2P5A7B4	A0A2P5E215	Nuclear pore protein.	Nucleoprotein TPR/MLP.	0.891
A0A2P5A7B4	A0A2P5E5Q4	A0A2P5A7B4	A0A2P5E5Q4	Nuclear pore protein.	Nucleoporin.	0.983
A0A2P5A7B4	A0A2P5E617	A0A2P5A7B4	A0A2P5E617	Nuclear pore protein.	Coatomer beta subunit.	0.850
A0A2P5A7B4	A0A2P5E674	A0A2P5A7B4	A0A2P5E674	Nuclear pore protein.	Peptidase.	0.973
A0A2P5A7B4	A0A2P5E8D0	A0A2P5A7B4	A0A2P5E8D0	Nuclear pore protein.	Nucleoporin, Nup155-like.	0.999
A0A2P5A7B4	A0A2P5EAK1	A0A2P5A7B4	A0A2P5EAK1	Nuclear pore protein.	Uncharacterized protein.	0.973
A0A2P5A7B4	A0A2P5EAY7	A0A2P5A7B4	A0A2P5EAY7	Nuclear pore protein.	GRIP.	0.955
A0A2P5A7B4	A0A2P5EBD7	A0A2P5A7B4	A0A2P5EBD7	Nuclear pore protein.	Nucleoporin.	0.995
A0A2P5A7B4	A0A2P5ED35	A0A2P5A7B4	A0A2P5ED35	Nuclear pore protein.	Uncharacterized protein.	0.999
A0A2P5A7B4	A0A2P5EJ61	A0A2P5A7B4	A0A2P5EJ61	Nuclear pore protein.	Nucleoporin.	0.997
A0A2P5A7B4	A0A2P5EM51	A0A2P5A7B4	A0A2P5EM51	Nuclear pore protein.	Nucleoporin.	0.998
A0A2P5A7B4	A0A2P5ESQ6	A0A2P5A7B4	A0A2P5ESQ6	Nuclear pore protein.	Nuclear pore complex protein NUP35.	0.999
A0A2P5A7B4	A0A2P5ETW9	A0A2P5A7B4	A0A2P5ETW9	Nuclear pore protein.	Nucleoporin.	0.983