(14 nodes) Proteasome accessory complex network (Trema orientale)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2P5EL07	DSS1/SEM. (135 aa)
	A0A2P5BG19	26S proteasome regulatory subunit. (115 aa)
	A0A2P5BT96	DSS1/SEM. (73 aa)
	A0A2P5C376	26S proteasome subunit P; Belongs to the AAA ATPase family. (445 aa)
	A0A2P5E194	JAB1/MPN/MOV34 metalloenzyme. (312 aa)
	A0A2P5E6Z7	26S proteasome complex ubiquitin receptor, subunit Rpn. (318 aa)
	A0A2P5EC09	Winged helix-turn-helix DNA-binding domain containing protein. (487 aa)
	A0A2P5FYM2	Coatomer beta subunit. (1808 aa)
	A0A2P5FJI3	ATPase, AAA-type, core. (448 aa)
	A0A2P5FAE4	Proteasome component (PCI) domain containing protein. (478 aa)
	A0A2P5F505	ABI family. (300 aa)
	A0A2P5F4Z9	26S proteasome non-ATPase regulatory subunit Rpn. (193 aa)
	A0A2P5EYM2	Proteasome component (PCI) domain containing protein. (422 aa)
	A0A2P5EWN7	Winged helix-turn-helix DNA-binding domain containing protein. (489 aa)

Your Current Organism:

Trema orientale

NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2P5BG19	A0A2P5BT96	26S proteasome regulatory subunit.	DSS1/SEM.	0.885
A0A2P5BG19	A0A2P5C376	26S proteasome regulatory subunit.	26S proteasome subunit P; Belongs to the AAA ATPase family.	0.981
A0A2P5BG19	A0A2P5E194	26S proteasome regulatory subunit.	JAB1/MPN/MOV34 metalloenzyme.	0.969
A0A2P5BG19	A0A2P5E6Z7	26S proteasome regulatory subunit.	26S proteasome complex ubiquitin receptor, subunit Rpn.	0.992
A0A2P5BG19	A0A2P5EL07	26S proteasome regulatory subunit.	DSS1/SEM.	0.885
A0A2P5BG19	A0A2P5EYM2	26S proteasome regulatory subunit.	Proteasome component (PCI) domain containing protein.	0.991
A0A2P5BG19	A0A2P5F4Z9	26S proteasome regulatory subunit.	26S proteasome non-ATPase regulatory subunit Rpn.	0.947
A0A2P5BG19	A0A2P5F505	26S proteasome regulatory subunit.	ABI family.	0.947
A0A2P5BG19	A0A2P5FAE4	26S proteasome regulatory subunit.	Proteasome component (PCI) domain containing protein.	0.995
A0A2P5BG19	A0A2P5FJI3	26S proteasome regulatory subunit.	ATPase, AAA-type, core.	0.981
A0A2P5BG19	A0A2P5FYM2	26S proteasome regulatory subunit.	Coatomer beta subunit.	0.702
A0A2P5BT96	A0A2P5BG19	DSS1/SEM.	26S proteasome regulatory subunit.	0.885
A0A2P5BT96	A0A2P5C376	DSS1/SEM.	26S proteasome subunit P; Belongs to the AAA ATPase family.	0.908
A0A2P5BT96	A0A2P5E194	DSS1/SEM.	JAB1/MPN/MOV34 metalloenzyme.	0.885
A0A2P5BT96	A0A2P5E6Z7	DSS1/SEM.	26S proteasome complex ubiquitin receptor, subunit Rpn.	0.931
A0A2P5BT96	A0A2P5EC09	DSS1/SEM.	Winged helix-turn-helix DNA-binding domain containing protein.	0.885
A0A2P5BT96	A0A2P5EL07	DSS1/SEM.	DSS1/SEM.	0.930
A0A2P5BT96	A0A2P5EWN7	DSS1/SEM.	Winged helix-turn-helix DNA-binding domain containing protein.	0.885
A0A2P5BT96	A0A2P5EYM2	DSS1/SEM.	Proteasome component (PCI) domain containing protein.	0.953
A0A2P5BT96	A0A2P5F4Z9	DSS1/SEM.	26S proteasome non-ATPase regulatory subunit Rpn.	0.943