STRINGSTRING
potE1 potE1 cadB1 cadB1 speC speC cadB2 cadB2 cadA1 cadA1 cadA2 cadA2 cadB3 cadB3 cadC cadC potE2 potE2 speF speF yjeH yjeH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
potE1Putrescine-ornithine antiporter; Catalyzes both the uptake and excretion of putrescine. The uptake of putrescine is dependent on the membrane potential and the excretion involves putrescine-ornithine antiporter activity. Belongs to the amino acid-polyamine-organocation (APC) superfamily. Basic amino acid/polyamine antiporter (APA) (TC 2.A.3.2) family. (447 aa)
cadB1Lysine/cadaverine transport protein. (449 aa)
speCOrnithine decarboxylase; Constitutive. (712 aa)
cadB2Lysine/cadaverine transport protein. (435 aa)
cadA1RNA methyltransferase; Subunit of lysine decarboxylase. (737 aa)
cadA2RNA methyltransferase; Subunit of lysine decarboxylase. (715 aa)
cadB3Lysine/cadaverine transport protein. (439 aa)
cadCTranscriptional activator CadC. (515 aa)
potE2Putrescine-ornithine antiporter; Catalyzes both the uptake and excretion of putrescine. The uptake of putrescine is dependent on the membrane potential and the excretion involves putrescine-ornithine antiporter activity. Belongs to the amino acid-polyamine-organocation (APC) superfamily. Basic amino acid/polyamine antiporter (APA) (TC 2.A.3.2) family. (436 aa)
speFOrnithine decarboxylase; Inducible. (722 aa)
yjeHInner membrane protein. (421 aa)
Your Current Organism:
Shimwellia blattae
NCBI taxonomy Id: 630626
Other names: Escherichia blattae CIP 104942, Escherichia blattae DSM 4481, Escherichia blattae NBRC 105725, S. blattae DSM 4481 = NBRC 105725, Shimwellia blattae CIP 104942, Shimwellia blattae DSM 4481, Shimwellia blattae DSM 4481 = NBRC 105725, Shimwellia blattae NBRC 105725, Shimwellia blattae NBRC 105725 = DSM 4481
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