STRINGSTRING
uhpC_2 uhpC_2 nreB_2 nreB_2 uhpA uhpA evgA evgA uhpC_1 uhpC_1 nreB_1 nreB_1 uhpA_1 uhpA_1 narP narP narX narX narL narL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
uhpC_22A0104: phosphoglycerate transporter family protein. (443 aa)
nreB_2Histidine kinase family protein. (510 aa)
uhpATranscriptional regulatory protein uhpA. (196 aa)
evgAPositive transcription regulator evgA. (204 aa)
uhpC_1Major Facilitator Superfamily protein. (441 aa)
nreB_1Histidine kinase family protein. (525 aa)
uhpA_1Bacterial regulatory s, luxR family protein. (209 aa)
narPBacterial regulatory s, luxR family protein. (216 aa)
narXNitrate/nitrite sensor protein narX. (593 aa)
narLBacterial regulatory s, luxR family protein. (209 aa)
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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