STRINGSTRING
rbsC_3 rbsC_3 livM livM rbsC_6 rbsC_6 rbsC_7 rbsC_7 yjfF yjfF ytfT ytfT rbsC_8 rbsC_8 xylH xylH urtC urtC livH livH alsC_3 alsC_3 urtB urtB CH53_859 CH53_859 livH_1 livH_1 alsC_1 alsC_1 rbsC_1 rbsC_1 rbsC_2 rbsC_2 alsC_2 alsC_2 rbsC_5 rbsC_5 rbsC1 rbsC1 rbsC_4 rbsC_4 lsrD_1 lsrD_1 mglC mglC lsrD_2 lsrD_2 lsrC lsrC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rbsC_3Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (332 aa)
livMBranched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (428 aa)
rbsC_6Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (329 aa)
rbsC_7Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (317 aa)
yjfFBranched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (330 aa)
ytfTBranched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (332 aa)
rbsC_8Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (322 aa)
xylHBranched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (394 aa)
urtCurea_trans_UrtC: urea ABC transporter, permease protein UrtC; Belongs to the binding-protein-dependent transport system permease family. (358 aa)
livHHigh-affinity branched-chain amino acid transport system permease protein livH; Belongs to the binding-protein-dependent transport system permease family. (308 aa)
alsC_3Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (326 aa)
urtBurea_trans_UrtB: urea ABC transporter, permease protein UrtB; Belongs to the binding-protein-dependent transport system permease family. (519 aa)
CH53_859Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (350 aa)
livH_1Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (289 aa)
alsC_1Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (348 aa)
rbsC_1Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (329 aa)
rbsC_2Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (371 aa)
alsC_2Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (357 aa)
rbsC_5Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (351 aa)
rbsC1Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (346 aa)
rbsC_4Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (312 aa)
lsrD_1Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (327 aa)
mglCBranched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (336 aa)
lsrD_2Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (333 aa)
lsrCBranched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (359 aa)
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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