STRINGSTRING
rcsC_3 rcsC_3 barA_1 barA_1 barA_2 barA_2 glrK glrK baeS_1 baeS_1 cpxA_1 cpxA_1 phoQ phoQ rstB rstB cheA cheA zraS zraS bvgS_1 bvgS_1 rcsD rcsD bvgS_2 bvgS_2 kdpD kdpD phoR phoR ttrS ttrS creC creC evgS evgS envZ_2 envZ_2 arcB arcB kinE kinE cpxA cpxA glnL glnL fixL fixL envZ_1 envZ_1 rcsC_1 rcsC_1 basS basS baeS_2 baeS_2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rcsC_3rcsC Alpha-Beta-Loop family protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. (932 aa)
barA_1HAMP domain protein. (920 aa)
barA_2Sensory box protein. (1521 aa)
glrKHAMP domain protein. (478 aa)
baeS_1HAMP domain protein. (458 aa)
cpxA_1HAMP domain protein. (455 aa)
phoQVirulence sensor histidine kinase phoQ. (468 aa)
rstBHAMP domain protein. (434 aa)
cheAChemotaxis protein CheA. (688 aa)
zraSHis Kinase A domain protein. (479 aa)
bvgS_1Hpt domain protein. (1288 aa)
rcsDHpt domain protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB. (897 aa)
bvgS_2His Kinase A domain protein. (1064 aa)
kdpDUniversal stress family protein. (904 aa)
phoRphoR_proteo: phosphate regulon sensor kinase PhoR. (438 aa)
ttrSHis Kinase A domain protein. (586 aa)
creCHAMP domain protein. (475 aa)
evgSSensor protein evgS. (1204 aa)
envZ_2HAMP domain protein. (456 aa)
arcBSensory box protein. (778 aa)
kinESensory box protein. (593 aa)
cpxASensor protein CpxA. (458 aa)
glnLNitrogen regulation protein NR. (349 aa)
fixLHis Kinase A domain protein. (449 aa)
envZ_1HAMP domain protein. (450 aa)
rcsC_1HAMP domain protein. (940 aa)
basSHAMP domain protein. (360 aa)
baeS_2HAMP domain protein. (469 aa)
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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