STRINGSTRING
fucA11 fucA11 mdsA1 mdsA1 CAZ97460.1 CAZ97460.1 CAZ97461.1 CAZ97461.1 CAZ94406.1 CAZ94406.1 CAZ94407.1 CAZ94407.1 CAZ94408.1 CAZ94408.1 CAZ94409.1 CAZ94409.1 CAZ94410.1 CAZ94410.1 alfA3 alfA3 alfaA2 alfaA2 CAZ94413.1 CAZ94413.1 fucA2 fucA2 fucA1 fucA1 afcA2 afcA2 fucA3 fucA3 alfA1 alfA1 alfA4 alfA4 fucA4 fucA4 fucA6 fucA6 fucA9 fucA9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fucA11Alpha-L-fucosidase, family GH29; The alpha-L-fucosidase is responsible for hydrolyzing of alpha-1,6-linked fucose joined to an alpha-L-fucoside; Belongs to the family 29 of glycoside hydrolases (GH29); Signal peptide cleaved between the residue 26 and 27; Localized in the periplasmic space; High confidence in function and specificity. (500 aa)
mdsA1Mucin-desulfating sulfatase, family S1-11; Mucin-desulfating sulfatases hydrolyse the sulfate groups from oligosaccharides present in mucins (heavily glycosylated proteins). In the mucins, the main sulfated sugars are N-acetyl-D-glucosamine-6-sulfate, galactose-6-sulfate and galactose-3-sulfate; Belongs to the family 1 of sulfatases (S1: formylglycine-dependent sulfatases), subfamily 11; Signal peptide cleaved between the residues 29 and 30; Localized in the periplasmic space; Specificity unclear. (539 aa)
CAZ97460.1Alpha-L-fucosidase, family GH29, C-terminal fragment; Consists of a C-terminal alpha-L-fucosidase domain; The alpha-L-fucosidase is responsible for hydrolyzing of alpha-1,6-linked fucose joined to an alpha-L-fucoside; Belongs to the family 29 of glycoside hydrolases (GH29); High confidence in function and specificity. (257 aa)
CAZ97461.1Alpha-L-fucosidase, family GH29, N-terminal fragment; Consists of an N-terminal alpha-L-fucosidase domain; The alpha-L-fucosidase is responsible for hydrolyzing of alpha-1,6-linked fucose joined to an alpha- L-fucoside; Belongs to the family 29 of glycoside hydrolases (GH29); Contains a transmembrane segment; Localized in the cytoplasmic membrane; High confidence in function and specificity. (303 aa)
CAZ94406.1Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 25 and 26; Localized in the outer membrane; Hypothetical protein. (755 aa)
CAZ94407.1Hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 23 and 24; Localized in the periplasmic space; Hypothetical protein. (701 aa)
CAZ94408.1Beta-helix fold protein; This conserved protein likely adopts a right handed parallel beta-helix fold. Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Conserved hypothetical protein. (772 aa)
CAZ94409.1Sulfatase, family S1-16; The family 1 of sulfatases is composed of enzymes that require the posttranslational oxidation of a conserved cysteine (or serine) to a catalytic formylglycine to hydrolyze various sulfate ester substrates; Belongs to the family 1 of sulfatases (S1: formylglycine-dependent sulfatases), subfamily 16; Putative lipoprotein with a signal peptide cleaved between the residues 18 and 19. Possibly localized in the outer membrane; Family membership. (489 aa)
CAZ94410.1Modular protein containing a N-terminal domain adopting a parallel beta-helix fold and a C-terminal carbohydrate binding module of the family 16 (CBM16). The N-terminal domain is distantly related to the polysaccharide lyases of the family 9 (PL9). Features a signal peptide cleaved between residues 29 and 30. Localized in the periplasm; Specificity unclear. (792 aa)
alfA3Alpha-L-fucosidase, family GH29; Modular protein that consists of an N-terminal alpha-L-fucosidase module belonging to the family 29 of glycoside hydrolases (GH29), responsible for hydrolyzing of alpha-1,6-linked fucose joined to an alpha-L-fucoside and a C-terminal domain that could be involved in the binding to specific ligands such as carbohydrate or lipids substrates; Signal peptide cleaved between the residue 18 and 19; Localized in the periplasmic space; High confidence in function and specificity. (480 aa)
alfaA2Alpha-L-fucosidase, family GH29; Modular protein that consists of an N-terminal alpha-L-fucosidase module belonging to the family 29 of glycoside hydrolases (GH29), responsible for hydrolyzing of alpha-1,6-linked fucose joined to an alpha-L-fucoside and a C-terminal domain of two hundred residues that could be involved in the binding to specific ligands such as carbohydrate or lipids substrates; Signal peptide cleaved between the residue 19 and 20; Localized in the outer membrane; High confidence in function and specificity. (495 aa)
CAZ94413.1Beta-helix fold protein; This conserved protein likely adopts a right handed parallel beta-helix fold. Features a signal peptide cleaved between the residues 32 and 33. Localized in the periplasm; Conserved hypothetical protein. (812 aa)
fucA2Alpha-L-fucosidase, family GH29; The alpha-L-fucosidase is responsible for hydrolyzing of alpha-1,6-linked fucose joined to an alpha-L-fucoside; Belongs to the family 29 of glycoside hydrolases (GH29); Signal peptide cleaved between the residue 24 and 25; Localized in the outer membrane; High confidence in function and specificity. (372 aa)
fucA1Alpha-L-fucosidase, family GH29; The alpha-L-fucosidase is responsible for hydrolyzing of alpha-1,6-linked fucose joined to an alpha-L-fucoside; Belongs to the family 29 of glycoside hydrolases (GH29); Signal peptide cleaved between the residue 25 and 26; Localized in the periplasmic space; High confidence in function and specificity. (494 aa)
afcA2Alpha-L-fucosidase, family GH95; The alpha-L-fucosidase is responsible for hydrolyzing of alpha-1,6-linked fucose joined to an alpha-L-fucoside; Belongs to the family 95 of the glycoside hydrolases (GH95); Features a lipoprotein signal peptide cleaved between the residues 23 and 24; Localized in the outer membrane; High confidence in function and specificity. (791 aa)
fucA3Alpha-L-fucosidase, family GH29; The alpha-L-fucosidase is responsible for hydrolyzing of alpha-1,6-linked fucose joined to an alpha-L-fucoside; Belongs to the family 29 of glycoside hydrolases (GH29); Localized in the cytoplasm; High confidence in function and specificity. (498 aa)
alfA1Alpha-L-fucosidase, family GH29; Modular protein that consists of an N-terminal alpha-L-fucosidase module belonging to the family 29 of glycoside hydrolases (GH29), responsible for hydrolyzing of alpha-1,6-linked fucose joined to an alpha-L-fucoside and a C-terminal domain that could be involved in the binding to specific ligands such as carbohydrate or lipids substrates; Signal peptide cleaved between the residue 22 and 23; Localized in the periplasmic space; High confidence in function and specificity. (662 aa)
alfA4Alpha-L-fucosidase, family GH29; Modular protein that consists of an N-terminal alpha-L-fucosidase module belonging to the family 29 of glycoside hydrolases (GH29), responsible for hydrolyzing of alpha-1,6-linked fucose joined to an alpha-L-fucoside and a C-terminal domain that could be involved in the binding to specific ligands such as carbohydrate or lipids substrates; Signal peptide cleaved between the residue 27 and 28; Localized in the periplasmic space; High confidence in function and specificity. (602 aa)
fucA4Alpha-L-fucosidase, family GH29; The alpha-L-fucosidase is responsible for hydrolyzing of alpha-1,6-linked fucose joined to an alpha-L-fucoside; Belongs to the family 29 of glycoside hydrolases (GH29); Signal peptide cleaved between the residue 19 and 20; Localized in the periplasmic space; High confidence in function and specificity. (507 aa)
fucA6Alpha-L-fucosidase, family GH29; The alpha-L-fucosidase is responsible for hydrolyzing of alpha-1,6-linked fucose joined to an alpha-L-fucoside; Belongs to the family 29 of glycoside hydrolases (GH29); Signal peptide cleaved between the residue 27 and 28; Localized in the periplasmic space; High confidence in function and specificity. (510 aa)
fucA9Alpha-L-fucosidase, family GH29; The alpha-L-fucosidase is responsible for hydrolyzing of alpha-1,6-linked fucose joined to an alpha-L-fucoside; Belongs to the family 29 of glycoside hydrolases (GH29); Signal peptide of lipoprotein cleaved between the residue 16 and 17; Probably localized in the outer membrane; High confidence in function and specificity. (513 aa)
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.