30 items (Rhodococcus opacus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	iscA	Putative iron-sulfur cluster assembly protein IscA; Belongs to the HesB/IscA family. (116 aa)
	ROP_14720	Putative FMN-binding protein. (149 aa)
	ROP_16320	Putative ferredoxin--NADP(+) reductase. (553 aa)
	ROP_17950	Putative ferredoxin--NADP(+) reductase. (541 aa)
	ROP_18190	Putative ferredoxin--NADP(+) reductase. (561 aa)
	ROP_19550	Putative ferredoxin--NADP(+) reductase. (463 aa)
	pobA	P-hydroxybenzoate hydroxylase; Protein synonym:4-hydroxybenzoate 3-monooxygenase. (392 aa)
	ROP_26710	Cytochrome P450. (402 aa)
	ROP_26720	Oxidoreductase. (322 aa)
	ROP_28620	Oxidoreductase. (319 aa)
	ROP_31790	Cytochrome P450. (412 aa)
	ROP_33120	Hypothetical protein. (203 aa)
	ROP_33130	Ferredoxin reductase. (409 aa)
	ROP_33140	2Fe-2S ferredoxin. (107 aa)
	ROP_33150	Cytochrome P450. (410 aa)
	ROP_37440	Putative phenol hydroxylase reductase component. (342 aa)
	ROP_37450	Putative cytochrome P450. (404 aa)
	ROP_37460	Putative AraC family transcriptional regulator. (337 aa)
	ROP_42810	2Fe-2S ferredoxin. (120 aa)
	ROP_45680	Ferredoxin reductase. (409 aa)
	ROP_45690	Cytochrome P450. (440 aa)
	ROP_45700	2Fe-2S ferredoxin. (106 aa)
	ROP_46800	2Fe-2S ferredoxin. (106 aa)
	ROP_51740	Putative ferredoxin--NADP(+) reductase. (559 aa)
	ROP_52840	Putative oxidoreductase. (586 aa)
	thcB	Cytochrome P450 116; Protein synonym:CYP116; Belongs to the cytochrome P450 family. (437 aa)
	ROP_53860	Putative cytochrome P450. (404 aa)
	iscS	Cysteine desulfurase. (406 aa)
	iscU	Putative iron-sulfur cluster assembly protein IscU. (166 aa)
	ROP_70810	2Fe-2S ferredoxin. (105 aa)

Your Current Organism:

Rhodococcus opacus

NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ROP_14720	ROP_18190	ROP_14720	ROP_18190	Putative FMN-binding protein.	Putative ferredoxin--NADP(+) reductase.	0.416
ROP_14720	ROP_19550	ROP_14720	ROP_19550	Putative FMN-binding protein.	Putative ferredoxin--NADP(+) reductase.	0.437
ROP_14720	ROP_37450	ROP_14720	ROP_37450	Putative FMN-binding protein.	Putative cytochrome P450.	0.624
ROP_14720	ROP_37460	ROP_14720	ROP_37460	Putative FMN-binding protein.	Putative AraC family transcriptional regulator.	0.432
ROP_14720	ROP_51740	ROP_14720	ROP_51740	Putative FMN-binding protein.	Putative ferredoxin--NADP(+) reductase.	0.426
ROP_14720	ROP_53860	ROP_14720	ROP_53860	Putative FMN-binding protein.	Putative cytochrome P450.	0.471
ROP_16320	ROP_17950	ROP_16320	ROP_17950	Putative ferredoxin--NADP(+) reductase.	Putative ferredoxin--NADP(+) reductase.	0.960
ROP_16320	ROP_18190	ROP_16320	ROP_18190	Putative ferredoxin--NADP(+) reductase.	Putative ferredoxin--NADP(+) reductase.	0.622
ROP_16320	ROP_19550	ROP_16320	ROP_19550	Putative ferredoxin--NADP(+) reductase.	Putative ferredoxin--NADP(+) reductase.	0.944
ROP_16320	ROP_26720	ROP_16320	ROP_26720	Putative ferredoxin--NADP(+) reductase.	Oxidoreductase.	0.584
ROP_16320	ROP_28620	ROP_16320	ROP_28620	Putative ferredoxin--NADP(+) reductase.	Oxidoreductase.	0.712
ROP_16320	ROP_33140	ROP_16320	ROP_33140	Putative ferredoxin--NADP(+) reductase.	2Fe-2S ferredoxin.	0.540
ROP_16320	ROP_37440	ROP_16320	ROP_37440	Putative ferredoxin--NADP(+) reductase.	Putative phenol hydroxylase reductase component.	0.858
ROP_16320	ROP_37450	ROP_16320	ROP_37450	Putative ferredoxin--NADP(+) reductase.	Putative cytochrome P450.	0.408
ROP_16320	ROP_42810	ROP_16320	ROP_42810	Putative ferredoxin--NADP(+) reductase.	2Fe-2S ferredoxin.	0.910
ROP_16320	ROP_45700	ROP_16320	ROP_45700	Putative ferredoxin--NADP(+) reductase.	2Fe-2S ferredoxin.	0.540
ROP_16320	ROP_46800	ROP_16320	ROP_46800	Putative ferredoxin--NADP(+) reductase.	2Fe-2S ferredoxin.	0.540
ROP_16320	ROP_51740	ROP_16320	ROP_51740	Putative ferredoxin--NADP(+) reductase.	Putative ferredoxin--NADP(+) reductase.	0.960
ROP_16320	ROP_52840	ROP_16320	ROP_52840	Putative ferredoxin--NADP(+) reductase.	Putative oxidoreductase.	0.593
ROP_16320	ROP_70810	ROP_16320	ROP_70810	Putative ferredoxin--NADP(+) reductase.	2Fe-2S ferredoxin.	0.910