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| | Tagg_0655 | COGs: COG1829 kinase (sugar kinase superfamily); SPTR: B8D3I2 Kinase (Sugar kinase superfamily)-like protein. (279 aa) |
| | Tagg_0656 | Pantothenate synthetase; COGs: COG1701 conserved hypothetical protein; InterPro IPR002855; PFAM: Protein of unknown function DUF137; SPTR: B8D3I1 Putative uncharacterized protein; PFAM: Protein of unknown function DUF137. (260 aa) |
| | Tagg_0658 | COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR007085:IPR003382:IPR005252; KEGG: gem:GM21_2546 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; SPTR: B8D3H7 Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopanto [...] (406 aa) |
| | Tagg_0660 | COGs: COG0017 Aspartyl/asparaginyl-tRNA synthetase; InterProIPR002312:IPR004364:IPR004365:IPR006195:IPR 004522; KEGG: acp:A2cp1_2912 asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: B8D3H5 Asparaginyl-tRNA synthetase; TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase. (432 aa) |
| | serS | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). (460 aa) |
| | Tagg_0704 | aspartyl-tRNA synthetase; COGs: COG0017 Aspartyl/asparaginyl-tRNA synthetase; InterProIPR002312:IPR004364:IPR004365:IPR006195:IPR 004523; KEGG: GA17710 gene product from transcript GA17710-RA; K01876 aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: B8D556 Aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); TIGRFAM: aspartyl-tRNA synthetase, archaeal type. (420 aa) |
| | adk | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (223 aa) |
| | priL | DNA primase, large subunit; Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair. (386 aa) |
| | Tagg_0724 | COGs: COG0301 Thiamine biosynthesis ATP pyrophosphatase; InterPro IPR004114:IPR018317:IPR003720; KEGG: pmr:PMI0097 thiamine biosynthesis protein ThiI; PFAM: thiamine biosynthesis protein; THUMP domain protein; Queuosine synthesis-like; SPTR: A3DLP8 Thiamine biosynthesis protein; PFAM: Thiamine biosynthesis protein (ThiI); THUMP domain; TIGRFAM: thiazole biosynthesis/tRNA modification protein ThiI. (381 aa) |
| | Tagg_0725 | t-RNA-binding domain protein; COGs: COG0073 EMAP domain; InterPro IPR002547; KEGG: dol:Dole_3204 methionyl-tRNA synthetase; PFAM: t-RNA-binding domain protein; SPTR: B8D4Z2 Methionyl-tRNA synthetase, beta subunit; PFAM: Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain. (109 aa) |
| | Tagg_0730 | COGs: COG1488 Nicotinic acid phosphoribosyltransferase; InterPro IPR002638; KEGG: nis:NIS_1072 nicotinate phosphoribosyltransferase; PFAM: Quinolinate phosphoribosyl transferase; SPTR: B8D4Y7 Quinolinate phosphoribosyl transferase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: putative nicotinate phosphoribosyltransferase. (389 aa) |
| | Tagg_0734 | COGs: COG2820 Uridine phosphorylase; InterPro IPR000845:IPR010058; KEGG: ara:Arad_9873 uridine phosphorylase; PFAM: purine or other phosphorylase family 1; SPTR: B8D4Y3 Uridine phosphorylase; TIGRFAM: uridine phosphorylase; PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD); uridine phosphorylase. (291 aa) |
| | thrS | Threonyl-tRNA synthetase editing domain protein; COGs: COG0441 Threonyl-tRNA synthetase; InterProIPR018158:IPR002314:IPR004154:IPR015011:IPR 006195; KEGG: pol:Bpro_2102 threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase; PFAM: Threonyl-tRNA synthetase editing domain protein; Anticodon-binding domain protein; tRNA synthetase class II (G H P and S); SPTR: B8D611 Threonyl-tRNA synthetase; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); Archaea-specific editing domain of threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; Belongs to the cla [...] (613 aa) |
| | Tagg_0487 | COGs: COG0143 Methionyl-tRNA synthetase; InterPro IPR014758:IPR015413:IPR001412:IPR002304; KEGG: nam:NAMH_1243 methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); SPTR: A3DPP0 Methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetases class I (M); TIGRFAM: methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (503 aa) |
| | thiM | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. (274 aa) |
| | thiE | Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. (218 aa) |
| | Tagg_0777 | Phosphomethylpyrimidine kinase; COGs: COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; InterPro IPR013749:IPR004399; KEGG: sfu:Sfum_1692 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; SPTR: B8D4K9 Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase. (290 aa) |
| | Tagg_0779 | COGs: COG2236 phosphoribosyltransferase; InterPro IPR000836; KEGG: mca:MCA2827 phosphoribosyl transferase domain-containing protein; PFAM: phosphoribosyltransferase; SPTR: B8D3X3 Phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain. (204 aa) |
| | Tagg_0780 | COGs: COG0519 GMP synthase PP-ATPase domain/subunit; InterProIPR006220:IPR011702:IPR001317:IPR001674:IPR 000991:IPR004739; KEGG: mes:Meso_0495 GMP synthase; PFAM: glutamine amidotransferase class-I; GMP synthase domain protein; PRIAM: GMP synthase (glutamine-hydrolyzing); SPTR: B8D3X4 GMP synthase; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase C terminal domain; Glutamine amidotransferase class-I; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit. (521 aa) |
| | hisS | COGs: COG0124 Histidyl-tRNA synthetase; InterPro IPR002314:IPR004154:IPR006195:IPR015807; KEGG: ATHRS1; ATHRS1 (HISTIDYL-TRNA SYNTHETASE 1); histidine-tRNA ligase; K01892 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; PRIAM: Histidine--tRNA ligase; SPTR: B8D606 Histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. (427 aa) |
| | Tagg_0822 | Protein of unknown function DUF701, zinc-binding protein; COGs: COG4888 Uncharacterized Zn ribbon-containing protein; InterPro IPR007808; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF701, zinc-binding protein; SPTR: B8D5Y7 Putative uncharacterized protein; PFAM: Transcription elongation factor Elf1 like. (109 aa) |
| | Tagg_0828 | COGs: COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase delta subunit; InterPro IPR001450:IPR017900:IPR011898; KEGG: sat:SYN_00694 pyruvate synthase delta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8D5Y1 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; PFAM: 4Fe-4S binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family. (93 aa) |
| | Tagg_0829 | Pyruvate/ketoisovalerate oxidoreductase, gamma subunit; COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752:IPR011894; KEGG: sfu:Sfum_0543 pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase; PRIAM: Pyruvate synthase; SPTR: B8D5Y0 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxo [...] (192 aa) |
| | rpl3 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (395 aa) |
| | rpl4 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. (271 aa) |
| | rpl23 | LSU ribosomal protein L23P; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. (91 aa) |
| | rpl2 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (239 aa) |
| | rps19p | SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (141 aa) |
| | rpl22 | LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (157 aa) |
| | rps3 | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family. (229 aa) |
| | rpl29 | LSU ribosomal protein L29P; InterPro IPR001854:IPR018254; KEGG: dat:HRM2_36180 RpmC; PFAM: ribosomal protein L29; SPTR: B8D5W3 50S ribosomal protein L29P; TIGRFAM: ribosomal protein L29; PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (82 aa) |
| | rps17 | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (117 aa) |
| | rpl14 | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (142 aa) |
| | rpl24 | LSU ribosomal protein L24P; Located at the polypeptide exit tunnel on the outside of the subunit. (132 aa) |
| | rps4e | COGs: COG1471 Ribosomal protein S4E; InterPro IPR013845:IPR013843:IPR002942; KEGG: 40S ribosomal protein S4; K02987 small subunit ribosomal protein S4e; PFAM: Ribosomal protein S4E, central domain protein; Ribosomal protein S4E domain protein; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: B8D5V8 30S ribosomal protein S4e; PFAM: S4 domain; Ribosomal family S4e; RS4NT (NUC023) domain; Belongs to the eukaryotic ribosomal protein eS4 family. (252 aa) |
| | rpl5 | LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (191 aa) |
| | rps14 | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles. (54 aa) |
| | rps8 | SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (133 aa) |
| | rpl6 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (184 aa) |
| | rpl32e | COGs: COG1717 Ribosomal protein L32E; InterPro IPR001515:IPR018263; KEGG: 60S ribosomal protein L32; K02912 large subunit ribosomal protein L32e; PFAM: Ribosomal protein L32e; SPTR: B8D5V3 50S ribosomal protein L32e; PFAM: Ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family. (141 aa) |
| | rpl19e | LSU ribosomal protein L19E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. (152 aa) |
| | rpl18 | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (198 aa) |
| | rps5 | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy. (214 aa) |
| | rpl30 | LSU ribosomal protein L30P; InterPro IPR000517:IPR005997; KEGG: 60S RIBOSOMAL PROTEIN L7; K02937 large subunit ribosomal protein L7e; PFAM: ribosomal protein L30; SPTR: A3DNC8 50S ribosomal protein L30P; TIGRFAM: ribosomal protein L30P; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: 50S ribosomal protein L30P, archaeal. (164 aa) |
| | rpl15 | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (148 aa) |
| | rpl34e | COGs: COG2174 Ribosomal protein L34E; InterPro IPR008195; KEGG: GE10642 gene product from transcript GE10642-RA; PFAM: Ribosomal protein L34e; SPTR: B8D5U5 50S ribosomal protein L34e; PFAM: Ribosomal protein L34e; Belongs to the eukaryotic ribosomal protein eL34 family. (86 aa) |
| | cmk | COGs: COG1102 Cytidylate kinase; InterPro IPR011892; KEGG: similar to UMP-CMP kinase (Cytidylate kinase) (Deoxycytidylate kinase) (Cytidine monophosphate kinase) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate kinase); PRIAM: Cytidylate kinase; SPTR: B8D5U4 Cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: Adenylate kinase; TIGRFAM: cytidylate kinase, putative. (180 aa) |
| | rpl14e | COGs: COG2163 Ribosomal protein L14E/L6E/L27E; KEGG: hypothetical protein; K02875 large subunit ribosomal protein L14e; SPTR: B8D5U3 50S ribosomal protein L14e; Belongs to the eukaryotic ribosomal protein eL14 family. (96 aa) |
| | dcd | dCTP deaminase; Catalyzes the deamination of dCTP to dUTP. (177 aa) |
| | thyX | Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. (315 aa) |
| | Tagg_0924 | Anaerobic ribonucleoside-triphosphate reductase activating protein; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR007197:IPR012840; KEGG: wsu:WS0687 putative radical-activating enzyme; PFAM: Radical SAM domain protein; SPTR: A3DNG7 Anaerobic ribonucleoside-triphosphate reductase activating protein; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein. (253 aa) |
| | rps19e | SSU ribosomal protein S19E; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family. (162 aa) |
| | rpl39e | InterPro IPR000077; KEGG: 60S ribosomal protein L39; K02924 large subunit ribosomal protein L39e; PFAM: Ribosomal protein L39e; SPTR: B8D5Q7 50S ribosomal protein L39e; PFAM: Ribosomal L39 protein; Belongs to the eukaryotic ribosomal protein eL39 family. (52 aa) |
| | rpl31e | COGs: COG2097 Ribosomal protein L31E; InterPro IPR000054:IPR020052; KEGG: Ribosomal protein L31B; K02910 large subunit ribosomal protein L31e; SPTR: A3DNH4 50S ribosomal protein L31e; PFAM: Ribosomal protein L31e; Belongs to the ribosomal protein L31e family. (99 aa) |
| | eif6 | Translation initiation factor 6 (aeIF-6); Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex. (227 aa) |
| | rpl18a | COGs: COG2157 Ribosomal protein L20A (L18A); InterPro IPR002768; PFAM: Ribosomal LX protein; SPTR: B8D5Q4 50S ribosomal protein LX; PFAM: Ribosomal L18ae/LX protein domain. (87 aa) |
| | spt5 | LSU ribosomal protein L24A; Stimulates transcription elongation; Belongs to the archaeal Spt5 family. (162 aa) |
| | rpl11 | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family. (169 aa) |
| | rpl1 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. Probably involved in E site tRNA release. (213 aa) |
| | rpl10 | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (332 aa) |
| | rpl12 | LSU ribosomal protein L12AE; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the eukaryotic ribosomal protein P1/P2 family. (105 aa) |
| | alaS | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (908 aa) |
| | eif2b | Translation initiation factor 2 subunit beta (aeIF-2b); eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-beta/eIF-5 family. (141 aa) |
| | eif1a | Translation initiation factor 1A (aeIF-1A); Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (109 aa) |
| | Tagg_0979 | Threonyl/alanyl tRNA synthetase SAD; COGs: COG2872 metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain; InterPro IPR012947:IPR018165; KEGG: rfe:RF_0777 metal-dependent hydrolase; PFAM: Threonyl/alanyl tRNA synthetase SAD; SPTR: A1RZG1 Predicted alanyl-tRNA synthetase-like metal-dependent hydrolase; PFAM: Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A). (254 aa) |
| | Tagg_0983 | Hypothetical protein; SPTR: A3DMF5 Putative uncharacterized protein. (165 aa) |
| | pth | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. (115 aa) |
| | ef1b | Translation elongation factor 1B (aEF-1B); Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA. (90 aa) |
| | nadK | ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. (272 aa) |
| | Tagg_1007 | COGs: COG0525 Valyl-tRNA synthetase; InterProIPR019754:IPR015413:IPR013155:IPR002300:IPR 004039; KEGG: amf:AMF_883 valyl-tRNA synthetase (ValS); PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; tRNA synthetase class I (M); SPTR: B8D5J8 Valyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain. (818 aa) |
| | mtnP | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. (273 aa) |
| | Tagg_1016 | COGs: COG2236 phosphoribosyltransferase; InterPro IPR000836:IPR002375; KEGG: sat:SYN_03353 xanthine-guanine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: B8D5J0 Predicted phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain. (227 aa) |
| | Tagg_1046 | LSU ribosomal protein L40E; InterPro IPR001975; KEGG: UBI1/2; ubiquitin extension protein 1/2; K02927 large subunit ribosomal protein L40e; PFAM: Ribosomal protein L40e; SPTR: B8D507 50S ribosomal protein L40e; PFAM: Ribosomal L40e family; Belongs to the eukaryotic ribosomal protein eL40 family. (58 aa) |
| | Tagg_1067 | COGs: COG0180 Tryptophanyl-tRNA synthetase; InterPro IPR002306:IPR002305:IPR001412; KEGG: tryptophanyl-tRNA synthetase; K01867 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; PRIAM: Tryptophan--tRNA ligase; SPTR: B8D6Q2 Tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase. (368 aa) |
| | Tagg_1068 | Orotidine 5'-phosphate decarboxylase; COGs: COG0269 3-hexulose-6-phosphate synthase and related protein; InterPro IPR001754; KEGG: kpn:KPN_02957 putative hexulose 6 phosphate synthase; PFAM: Orotidine 5'-phosphate decarboxylase; SPTR: B8D6Q1 Hexulose-6-phosphate synthase; PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: 3-hexulose-6-phosphate synthase. (218 aa) |
| | Tagg_1069 | COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: hypothetical protein LOC100248560; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: A3DLU1 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase family. (241 aa) |
| | Tagg_1075 | Hypothetical protein; SPTR: B8D6P4 Putative uncharacterized protein. (199 aa) |
| | cysS | COGs: COG0215 Cysteinyl-tRNA synthetase; InterProIPR015803:IPR015413:IPR015273:IPR019800:IPR 002308; KEGG: cbc:CbuK_1718 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia DALR; PRIAM: Cysteine--tRNA ligase; SPTR: B8D4U9 Cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase. (481 aa) |
| | Tagg_1091 | Hypothetical protein; InterPro IPR002792; KEGG: mmb:Mmol_0711 RNA methyltransferase, TrmA family; SPTR: B8D4U4 Deoxyribonuclease/rho motif-related TRAM. (100 aa) |
| | Tagg_1095 | 2-amino-3-ketobutyrate coenzyme A ligase; COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839:IPR001917; KEGG: gbm:Gbem_0049 pyridoxal phosphate-dependent acyltransferase; PFAM: aminotransferase class I and II; PRIAM: Glycine C-acetyltransferase; SPTR: B8D4W3 Pyridoxal phosphate-dependent acyltransferase, putative; PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; pyridoxal phosphate-dependent acyltransferase, putative. (403 aa) |
| | prf1 | Peptide chain release factor subunit 1 (aeRF-1); Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA. (363 aa) |
| | Tagg_1152 | InterPro IPR009563; PFAM: Sjogrens syndrome scleroderma autoantigen 1; SPTR: A3DM72 Sjogrens syndrome scleroderma autoantigen 1; PFAM: Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27). (125 aa) |
| | tmk | COGs: COG0125 Thymidylate kinase; InterPro IPR000062:IPR018095:IPR018094; KEGG: xfn:XfasM23_1654 dTMP kinase; PFAM: thymidylate kinase; PRIAM: dTMP kinase; SPTR: B8D357 Thymidylate kinase; TIGRFAM: thymidylate kinase; PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase. (203 aa) |
| | rpl44e | LSU ribosomal protein L44E; Binds to the 23S rRNA. (95 aa) |
| | rps27e | COGs: COG2051 Ribosomal protein S27E; InterPro IPR000592; KEGG: ribosomal protein S27; K02978 small subunit ribosomal protein S27e; PFAM: Ribosomal protein S27E; SPTR: B8D536 30S ribosomal protein S27e; PFAM: Ribosomal protein S27. (68 aa) |
| | pyrG | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. (534 aa) |
| | Tagg_1165 | COGs: COG2236 phosphoribosyltransferase; InterPro IPR000836; KEGG: sat:SYN_03353 xanthine-guanine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: B8D3B6 Phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain. (184 aa) |
| | Tagg_1168 | COGs: COG2872 metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain; InterPro IPR012947:IPR018165; KEGG: hch:HCH_05059 metal-dependent hydrolase; PFAM: Threonyl/alanyl tRNA synthetase SAD; SPTR: A3DNM3 Ala-tRNA(Pro) hydrolase; PFAM: Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A). (238 aa) |
| | tfb | Transcription initiation factor IIB (TFIIB); Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). (306 aa) |
| | Tagg_1170 | COGs: COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related protein; InterPro IPR001950; KEGG: mmw:Mmwyl1_2203 translation initiation factor SUI1; PFAM: translation initiation factor SUI1; SPTR: B8D3B3 Translation initiation factor 1 (EIF-1/SUI1); PFAM: Translation initiation factor SUI1; TIGRFAM: translation initation factor SUI1, putative, prokaryotic; Belongs to the SUI1 family. (107 aa) |
| | Tagg_1171 | Hypothetical protein; SPTR: B8D3B2 DNA-directed RNA polymerase subunit P. (49 aa) |
| | Tagg_1173 | COGs: COG0423 Glycyl-tRNA synthetase (class II); InterPro IPR002315:IPR002314:IPR004154:IPR006195; KEGG: predicted protein; K01880 glycyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; SPTR: B8D3B0 Glycyl-tRNA synthetase; TIGRFAM: glycyl-tRNA synthetase; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type. (581 aa) |
| | Tagg_1183 | ATP-NAD/AcoX kinase; COGs: COG3199 conserved hypothetical protein; InterPro IPR002504; KEGG: cja:CJA_2375 NAD(+)/NADH kinase; PFAM: ATP-NAD/AcoX kinase; SPTR: B8D5H1 ATP-NAD/AcoX kinase; PFAM: ATP-NAD kinase. (377 aa) |
| | eif5a | Translation initiation factor 5A (eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. (132 aa) |
| | Tagg_1198 | COGs: COG0035 Uracil phosphoribosyltransferase; KEGG: rfr:Rfer_2073 uracil phosphoribosyltransferase; PRIAM: Uracil phosphoribosyltransferase; SPTR: B8D4X5 Uracil phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase. (221 aa) |
| | Tagg_1220 | Phosphoribosyltransferase; COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; InterPro IPR000836; KEGG: maq:Maqu_2814 adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: B8D622 Phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain. (269 aa) |
| | tyrS | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 4 subfamily. (362 aa) |
| | Tagg_1242 | ABC transporter related protein; COGs: COG1245 ATPase RNase L inhibitor (RLI) homolog; InterProIPR013283:IPR001450:IPR003439:IPR007209:IPR 003593:IPR017900:IPR017871; KEGG: Os11g0546000; hypothetical protein; K06174 ATP-binding cassette, sub-family E, member 1; PFAM: ABC transporter related; 4Fe-4S ferredoxin iron-sulfur binding domain protein; metal-binding domain in RNase L inhibitor, RLI; SMART: AAA ATPase; SPTR: B8D643 Putative ATPase RIL; PFAM: ABC transporter; 4Fe-4S binding domain; Possible metal-binding domain in RNase L inhibitor, RLI. (602 aa) |
| | Tagg_1243 | InterPro IPR001529; SMART: DNA-directed RNA polymerase, M/15 kDa subunit; SPTR: B8D644 DNA-directed RNA polymerase, M/15 kDa subunit. (97 aa) |
| | rps17e | COGs: COG1383 Ribosomal protein S17E; KEGG: 40S ribosomal protein S17-A; K02962 small subunit ribosomal protein S17e; SPTR: B8D645 30S ribosomal protein S17e; PFAM: Ribosomal S17; Belongs to the eukaryotic ribosomal protein eS17 family. (69 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. (416 aa) |
| | rpl37e | LSU ribosomal protein L37E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family. (62 aa) |
| | Tagg_1249 | COGs: COG2016 RNA-binding protein (contains PUA domain); InterPro IPR002478:IPR004521; KEGG: conserved hypothetical protein; K07575 PUA domain protein; PFAM: PUA domain containing protein; SMART: PUA domain containing protein; SPTR: A3DN31 RNA-binding protein, containing PUA domain; PFAM: PUA domain; TIGRFAM: uncharacterized domain 2. (161 aa) |
| | Tagg_1254 | Cytidyltransferase-related domain protein; COGs: COG1056 Nicotinamide mononucleotide adenylyltransferase; InterPro IPR004820:IPR004821; KEGG: aav:Aave_0974 cytidyltransferase-like protein; PFAM: cytidylyltransferase; PRIAM: Nicotinamide-nucleotide adenylyltransferase; SPTR: A3DN25 Nicotinamide-nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: nicotinamide-nucleotide adenylyltransferase; cytidyltransferase-related domain. (173 aa) |
| | Tagg_1257 | InterPro IPR013137; PFAM: Zinc finger TFIIB-type domain protein; SPTR: A3DN22 Zinc finger, TFIIB-type domain protein; PFAM: TFIIB zinc-binding. (203 aa) |
| | Tagg_1264 | 2-oxoglutarate synthase; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880; KEGG: dvm:DvMF_0184 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PRIAM: 2-oxoglutarate synthase; SPTR: Q9YA13 2-oxoacid:ferredoxin oxidoreductase alpha subunit; PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase. (636 aa) |
| | Tagg_1265 | COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766:IPR011896; KEGG: dat:HRM2_41100 PorB3; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; SPTR: A2BLG9 2-oxoglutarate synthase subunit korB; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: Pyruvate ferredoxin oxidoreductase beta subunit C terminal; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family. (317 aa) |
| | tfe | Transcription factor TFIIE, alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongatio [...] (179 aa) |
| | Tagg_1298 | COGs: COG0417 DNA polymerase elongation subunit (family B); InterProIPR017966:IPR006134:IPR006133:IPR006172:IPR 017964:IPR004578; KEGG: DNA polymerase delta catalytic chain; K02327 DNA polymerase delta subunit 1; PFAM: DNA polymerase B region; DNA polymerase B exonuclease; PRIAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase B; SPTR: B8D690 DNA polymerase; TIGRFAM: DNA polymerase Pol2; PFAM: DNA polymerase family B; DNA polymerase family B, exonuclease domain; TIGRFAM: DNA polymerase (pol2). (796 aa) |
| | Tagg_1318 | COGs: COG4933 conserved hypothetical protein; InterPro IPR000209; KEGG: pen:PSEEN4662 hypothetical protein; SPTR: B8D6A4 Putative uncharacterized protein. (158 aa) |
| | Tagg_1323 | COGs: COG4830 Ribosomal protein S26; InterPro IPR000892; KEGG: RPS26A; Protein component of the small (40S) ribosomal subunit; nearly identical to Rps26Bp and has similarity to rat S26 ribosomal protein; K02976 small subunit ribosomal protein S26e; PFAM: Ribosomal protein S26E; SPTR: B8D697 30S ribosomal protein S26e; PFAM: Ribosomal protein S26e. (95 aa) |
| | Tagg_1324 | COGs: COG0417 DNA polymerase elongation subunit (family B); InterProIPR017966:IPR006134:IPR006133:IPR006172:IPR 017964; KEGG: YALI0E11869p; K02320 DNA polymerase alpha subunit A; PFAM: DNA polymerase B region; DNA polymerase B exonuclease; PRIAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase B; SPTR: B8D6A9 DNA polymerase; PFAM: DNA polymerase family B; DNA polymerase family B, exonuclease domain. (860 aa) |
| | fusA | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] (736 aa) |
| | rpl37ae | LSU ribosomal protein L37AE; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL43 family. Putative zinc-binding subfamily. (86 aa) |
| | rpl15e | COGs: COG1632 Ribosomal protein L15E; InterPro IPR000439; KEGG: hypothetical protein LOC100246159; PFAM: Ribosomal protein L15e; SPTR: B8D6C6 50S ribosomal protein L15e; PFAM: Ribosomal L15; Belongs to the eukaryotic ribosomal protein eL15 family. (220 aa) |
| | Tagg_1347 | Nucleotidyl transferase; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR001451:IPR005835; KEGG: rlt:Rleg2_1725 UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; SPTR: B8D6C9 Glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylylransferase, long form. (408 aa) |
| | rps3ae | COGs: COG1890 Ribosomal protein S3AE; InterPro IPR001593:IPR018281; KEGG: hypothetical protein; K02984 small subunit ribosomal protein S3Ae; PFAM: ribosomal protein S3Ae; SPTR: B8D6D0 30S ribosomal protein S3Ae; PFAM: Ribosomal S3Ae family; Belongs to the eukaryotic ribosomal protein eS1 family. (215 aa) |
| | rps15 | COGs: COG0184 Ribosomal protein S15P/S13E; InterPro IPR012606:IPR000589; KEGG: Os08g0117300; hypothetical protein; K02953 small subunit ribosomal protein S13e; PFAM: Ribosomal S13S15 domain protein; ribosomal protein S15; SPTR: B8D6D3 30S ribosomal protein S15P/S13e; PFAM: Ribosomal S13/S15 N-terminal domain; Ribosomal protein S15. (166 aa) |
| | rps27ae | InterPro IPR002906; PFAM: Ribosomal protein S27a; SPTR: A3DMS8 Ribosomal protein S27a; PFAM: Ribosomal protein S27a; Belongs to the eukaryotic ribosomal protein eS31 family. (53 aa) |
| | rps24e | COGs: COG2004 Ribosomal protein S24E; InterPro IPR001976:IPR018098; KEGG: rps24; 40S ribosomal protein S24; K02974 small subunit ribosomal protein S24e; PFAM: Ribosomal protein S24e; SPTR: B8D6D7 30S ribosomal protein S24e; PFAM: Ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family. (110 aa) |
| | Tagg_1373 | Protein of unknown function DUF359; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA). (161 aa) |
| | Tagg_1375 | COGs: COG1095 DNA-directed RNA polymerase subunit E'; InterPro IPR005576:IPR003029:IPR004519; KEGG: zgc:92878; PFAM: RNA polymerase Rpb7 domain protein; PRIAM: DNA-directed RNA polymerase; SPTR: B8D6E0 DNA-directed RNA polymerase subunit E'; TIGRFAM: DNA-directed RNA polymerase; PFAM: S1 RNA binding domain; RNA polymerase Rpb7-like, N-terminal domain; TIGRFAM: DNA-directed RNA polymerase (rpoE), archaeal and eukaryotic form. (192 aa) |
| | eif2g | Translation initiation factor 2 subunit gamma (aeIF-2g); eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily. (416 aa) |
| | rps6e | COGs: COG2125 Ribosomal protein S6E (S10); InterPro IPR001377:IPR018282; KEGG: 40S ribosomal protein S6; PFAM: Ribosomal protein S6e; SPTR: B8D6E3 30S ribosomal protein S6e; PFAM: Ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. (217 aa) |
| | infB | Translation initiation factor eaIF-5B; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. (602 aa) |
| | rpl24e | LSU ribosomal protein L24E; Binds to the 23S rRNA. (61 aa) |
| | rps28e | COGs: COG2053 Ribosomal protein S28E/S33; InterPro IPR000289; KEGG: RS28_KLULA; K02979 small subunit ribosomal protein S28e; PFAM: Ribosomal protein S28e; SPTR: A3DMR7 SSU ribosomal protein S28E; PFAM: Ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family. (89 aa) |
| | rpl7ae | LSU ribosomal protein L7AE; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. (127 aa) |
| | gltX | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). (578 aa) |
| | rps2 | COGs: COG0052 Ribosomal protein S2; InterPro IPR001865:IPR018130:IPR005707; KEGG: RSP1; 40S ribosomal protein-like protein; K02998 small subunit ribosomal protein SAe; PFAM: ribosomal protein S2; SPTR: B8D6F3 30S ribosomal protein S2P; TIGRFAM: ribosomal protein S2; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein Sa(cytosolic)/S2(archaeal); Belongs to the universal ribosomal protein uS2 family. (219 aa) |
| | rpoN | DNA-directed RNA polymerase, subunit N; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoN/eukaryotic RPB10 RNA polymerase subunit family. (66 aa) |
| | rps9 | COGs: COG0103 Ribosomal protein S9; InterPro IPR000754:IPR019958; KEGG: Os12g0124200; hypothetical protein; K02960 small subunit ribosomal protein S16e; PFAM: ribosomal protein S9; SPTR: A3DMQ9 30S ribosomal protein S9P; TIGRFAM: ribosomal protein S9P; PFAM: Ribosomal protein S9/S16; TIGRFAM: archaeal ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. (141 aa) |
| | rpl13 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (151 aa) |
| | rpl18e | COGs: COG1727 Ribosomal protein L18E; InterPro IPR001196; KEGG: hypothetical protein; K02883 large subunit ribosomal protein L18e; PFAM: ribosomal protein L15; SPTR: B8D6F7 50S ribosomal protein L15; PFAM: Ribosomal protein L18e/L15; Belongs to the eukaryotic ribosomal protein eL18 family. (120 aa) |
| | rpoD | DNA-directed RNA polymerase, subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (277 aa) |
| | rps11 | SSU ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. (133 aa) |
| | rps4 | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (173 aa) |
| | rps13 | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. (162 aa) |
| | rps10 | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa) |
| | tuf | Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (438 aa) |
| | rps7 | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family. (204 aa) |
| | rps12 | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. (148 aa) |
| | nusA | NusA family KH domain protein; Participates in transcription termination. Belongs to the NusA family. (148 aa) |
| | rpl30e | COGs: COG1911 Ribosomal protein L30E; InterPro IPR004038:IPR000231; KEGG: 60S ribosomal protein L30, putative; K02908 large subunit ribosomal protein L30e; PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; SPTR: A3DMP6 LSU ribosomal protein L30E; PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; Belongs to the eukaryotic ribosomal protein eL30 family. (109 aa) |
| | rpoA2 | DNA-directed RNA polymerase, subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (408 aa) |
| | Tagg_1406 | DNA-directed RNA polymerase, subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (881 aa) |
| | Tagg_1407 | DNA-directed RNA polymerase, subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1163 aa) |
| | rpoH | DNA-directed RNA polymerase, subunit H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. (87 aa) |
| | Tagg_0497 | Hypothetical protein; KEGG: structural maintenance of chromosomes protein (EC:1.12.98.1 1.3.1.74); K06675 structural maintenance of chromosome 4; SPTR: B8D4F1 Putative uncharacterized protein; PFAM: Transcriptional regulator. (243 aa) |
| | Tagg_0539 | Amidohydrolase; COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR006680; KEGG: D-hydantoinase (EC:3.5.2.2); K01465 dihydroorotase; PFAM: amidohydrolase; SPTR: A3DKS9 Amidohydrolase; PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type. (446 aa) |
| | leuS | COGs: COG0495 Leucyl-tRNA synthetase; InterProIPR015413:IPR013155:IPR002300:IPR001412:IPR 004493; KEGG: similar to CG33123 CG33123-PA; K01869 leucyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; tRNA synthetase class I (M); SPTR: B8D4B9 Leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, archaeal and cytosolic family. (968 aa) |
| | lysS | COGs: COG1384 Lysyl-tRNA synthetase (class I); InterPro IPR002904; KEGG: noc:Noc_1618 lysine--tRNA ligase; PFAM: Lysyl-tRNA synthetase class 1c; PRIAM: Lysine--tRNA ligase; SPTR: B8D4B7 Lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetases class I (K); TIGRFAM: lysyl-tRNA synthetase, archaeal and spirochete; Belongs to the class-I aminoacyl-tRNA synthetase family. (545 aa) |
| | ileS | Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily. (1057 aa) |
| | Tagg_0560 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (183 aa) |
| | Tagg_0571 | Hypothetical protein. (224 aa) |
| | Tagg_0592 | Protein of unknown function DUF198; COGs: COG1469 conserved hypothetical protein; InterPro IPR003801; KEGG: rpi:Rpic_2425 putative GTP cyclohydrolase; PFAM: protein of unknown function DUF198; SPTR: B8D3S2 Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1469. (285 aa) |
| | mptE | Protein of unknown function DUF115; Catalyzes the transfer of diphosphate from ATP to 6- hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6-hydroxymethyl- 7,8-dihydropterin diphosphate (6-HMDP). (246 aa) |
| | mptD | Conserved hypothetical protein; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD). (128 aa) |
| | Tagg_0604 | HAD-superfamily hydrolase, subfamily IA, variant 1; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834:IPR019758:IPR006439; KEGG: similar to predicted protein; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: B8D2Y2 Predicted hydrolase (HAD superfamily); TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. (240 aa) |
| | Tagg_0650 | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (309 aa) |
| | panB | Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. (268 aa) |
| | Tagg_0008 | Adenylate kinase; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Belongs to the adenylate kinase family. AK6 subfamily. (199 aa) |
| | pdxT | Pyridoxal phosphate synthase yaaE subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. (197 aa) |
| | pdxS | Pyridoxal phosphate synthase yaaD subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. (332 aa) |
| | Tagg_0024 | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. (227 aa) |
| | Tagg_0029 | RNA polymerase Rpb4; InterPro IPR005574; KEGG: hypothetical protein; K03012 DNA-directed RNA polymerase II subunit D; PFAM: RNA polymerase Rpb4; SPTR: B8D6K2 RNA polymerase Rpb4; PFAM: RNA polymerase Rpb4. (121 aa) |
| | rpl21e | COGs: COG2139 Ribosomal protein L21E; InterPro IPR001147:IPR018259; KEGG: hypothetical protein; K02889 large subunit ribosomal protein L21e; PFAM: Ribosomal protein L21e; SPTR: B8D6K3 50S ribosomal protein L21e; PFAM: Ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family. (105 aa) |
| | rpl10e | COGs: COG0197 Ribosomal protein L16/L10E; InterPro IPR016180:IPR018255; KEGG: 60S ribosomal protein L10; K02866 large subunit ribosomal protein L10e; PFAM: Ribosomal protein L10e/L16; SPTR: B8D6K6 50S ribosomal protein L10e; PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L10.e; Belongs to the universal ribosomal protein uL16 family. (172 aa) |
| | Tagg_0039 | COGs: COG1761 DNA-directed RNA polymerase subunit L; InterPro IPR011261:IPR008193; KEGG: Rpb11; CG6840 gene product from transcript CG6840-RA (EC:2.7.7.6); K03008 DNA-directed RNA polymerase II subunit J; PFAM: RNA polymerase dimerisation; SPTR: A3DM82 RNA polymerase, dimerisation. (92 aa) |
| | Tagg_0041 | COGs: COG1594 DNA-directed RNA polymerase subunit M/Transcription elongation factor TFIIS; InterPro IPR001222:IPR001529:IPR006288; KEGG: similar to MGC68582 protein; K03019 DNA-directed RNA polymerase III subunit C11; PFAM: Transcription factor TFIIS; SMART: Transcription factor TFIIS; DNA-directed RNA polymerase, M/15 kDa subunit; SPTR: A3DM83 DNA-directed RNA polymerase, subunit M; TIGRFAM: transcription factor S; PFAM: Transcription factor S-II (TFIIS); TIGRFAM: transcription factor S, archaeal; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (114 aa) |
| | priS | DNA primase small subunit; Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. [...] (370 aa) |
| | Tagg_0047 | COGs: COG1093 Translation initiation factor 2 alpha subunit (eIF-2alpha); InterPro IPR003029:IPR011488; KEGG: hypothetical protein; PFAM: translation initiation factor 2, alpha subunit; RNA binding S1 domain protein; SPTR: A3DM89 Translation initiation factor 2 subunit alpha; PFAM: Eukaryotic translation initiation factor 2 alpha subunit; S1 RNA binding domain. (265 aa) |
| | proS | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). (483 aa) |
| | Tagg_0077 | Beta-lactamase domain protein; COGs: COG1237 Metal-dependent hydrolase of the beta-lactamase superfamily II; InterPro IPR001279; KEGG: sat:SYN_01177 metallo-beta-lactamase superfamily protein; PFAM: beta-lactamase domain protein; SPTR: A3DNQ3 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily. (234 aa) |
| | atpB | H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit. (470 aa) |
| | atpA | H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (584 aa) |
| | Tagg_0080 | Hypothetical protein; SPTR: B8D5E1 Putative uncharacterized protein. (115 aa) |
| | atpE | H+transporting two-sector ATPase E subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (194 aa) |
| | Tagg_0087 | COGs: COG1394 H+-ATPase subunit D; InterPro IPR002699:IPR018483; KEGG: similar to vacuolar proton pump delta polypeptide; K02149 V-type H+-transporting ATPase subunit D; PFAM: H+transporting two-sector ATPase D subunit; SPTR: A3DNR4 V-type ATPase, D subunit; TIGRFAM: V-type ATPase, D subunit; PFAM: ATP synthase subunit D; TIGRFAM: H(+)-transporting ATP synthase, vacuolar type, subunit D. (206 aa) |
| | Tagg_0097 | Adenylyl cyclase CyaB; COGs: COG1437 Adenylate cyclase class 2 (thermophilic); InterPro IPR008172:IPR008173; KEGG: dvl:Dvul_1534 adenylate cyclase; PFAM: adenylate cyclase; SPTR: B8D5C7 Putative adenylyl cyclase CyaB; TIGRFAM: adenylyl cyclase CyaB; PFAM: CYTH domain; TIGRFAM: adenylyl cyclase CyaB, putative. (185 aa) |
| | Tagg_0106 | Protein of unknown function DUF120; COGs: COG1339 Transcriptional regulator of a riboflavin/FAD biosynthetic operon; InterPro IPR002834; KEGG: eba:ebA3131 hypothetical protein; PFAM: protein of unknown function DUF120; SPTR: B8D5C1 Riboflavin kinase; PFAM: Domain of unknown function DUF120. (143 aa) |
| | Tagg_0139 | Ribose-phosphate pyrophosphokinase; COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR000836:IPR002375:IPR006034:IPR005946; KEGG: wsu:WS1635 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: A3DNX0 Ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase. (304 aa) |
| | rps8e | COGs: COG2007 Ribosomal protein S8E; InterPro IPR001047:IPR018283; KEGG: hypothetical protein LOC100255497; PFAM: Ribosomal protein S8E; SPTR: B8D571 Ribosomal protein S8; TIGRFAM: ribosomal protein S8e; PFAM: Ribosomal protein S8e; TIGRFAM: ribosomal protein S8.e. (128 aa) |
| | Tagg_0149 | Zinc finger TFIIB-type domain protein; COGs: COG1405 Transcription initiation factor TFIIIB Brf1 subunit/Transcription initiation factor TFIIB; InterPro IPR000812:IPR013150:IPR013137:IPR006670; KEGG: Transcription initiation factor IIB; K03124 transcription initiation factor TFIIB; PFAM: Zinc finger TFIIB-type domain protein; Transcription factor TFIIB cyclin-related; SMART: Cyclin domain protein; SPTR: B8D567 Transcription initiation factor TFIIIB; PFAM: TFIIB zinc-binding; Transcription factor TFIIB repeat. (293 aa) |
| | Tagg_0157 | KEGG: similar to ribosomal protein s30; K02983 small subunit ribosomal protein S30e; SPTR: B8D4W1 Ribosomal_S30 domain containing protein; PFAM: Ribosomal protein S30. (51 aa) |
| | gatD | glutamyl-tRNA(Gln) amidotransferase subunit D; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate. (449 aa) |
| | gatE | glutamyl-tRNA(Gln) amidotransferase subunit E; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate. (648 aa) |
| | rpoK | RNA polymerase Rpb6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family. (107 aa) |
| | Tagg_0182 | Small GTP-binding protein; COGs: COG1163 GTPase; InterPro IPR006073:IPR002917:IPR004095:IPR005225; KEGG: similar to developmentally-regulated GTP-binding protein 2; PFAM: TGS domain protein; GTP-binding protein HSR1-related; SPTR: B8D373 GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: GTPase of unknown function; TGS domain; TIGRFAM: small GTP-binding protein domain. (386 aa) |
| | Tagg_0195 | Protein of unknown function DUF814; COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR008616:IPR008532; KEGG: hypothetical protein; PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; SPTR: B8D383 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA). (666 aa) |
| | nadE | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. (277 aa) |
| | lig | DNA ligase I, ATP-dependent Dnl1; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. (611 aa) |
| | tbp | TATA binding protein of transcription factor TFIID; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. (193 aa) |
| | Tagg_0225 | COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752; KEGG: gur:Gura_2134 indolepyruvate oxidoreductase subunit beta; PFAM: Pyruvate/ketoisovalerate oxidoreductase; SPTR: B8D3K9 Indolepyruvate oxidoreductase subunit iorB; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit. (200 aa) |
| | trpB | Pyridoxal-phosphate dependent TrpB-like enzyme; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (437 aa) |
| | Tagg_0268 | tRNA synthetase class II (D K and N); COGs: COG0017 Aspartyl/asparaginyl-tRNA synthetase; InterPro IPR004364:IPR006195; KEGG: afw:Anae109_2720 asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); SPTR: B8D3T2 tRNA synthetase, class II (D, K and N); PFAM: tRNA synthetases class II (D, K and N). (450 aa) |
| | Tagg_0293 | COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; InterPro IPR018157:IPR006195:IPR004529; KEGG: Hypothetical protein CBG12564; K01889 phenylalanyl-tRNA synthetase alpha chain; PFAM: Phenylalanyl-tRNA synthetase, class IIc-like; PRIAM: Phenylalanine--tRNA ligase; SPTR: B8D316 PheS; phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: tRNA synthetases class II core domain (F); TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit. (514 aa) |
| | Tagg_0297 | COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; InterPro IPR005146:IPR005147:IPR004531; KEGG: hypothetical protein; K01890 phenylalanyl-tRNA synthetase beta chain; PFAM: tRNA synthetase B5; B3/4 domain protein; PRIAM: Phenylalanine--tRNA ligase; SPTR: B8D2X0 Phenylalanyl-tRNA synthetase subunit beta; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase B5 domain; B3/4 domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit. (556 aa) |
| | Tagg_0303 | COGs: COG0167 Dihydroorotate dehydrogenase; InterPro IPR001450:IPR012135:IPR017900:IPR005720; KEGG: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate oxidase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8D2W4 Dihydroorotate dehydrogenase family protein; TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: Dihydroorotate dehydrogenase; 4Fe-4S binding domain; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein. (403 aa) |
| | Tagg_0329 | COGs: COG0035 Uracil phosphoribosyltransferase; KEGG: cti:RALTA_B1432 uracil phosphoribosyltransferase; PRIAM: Uracil phosphoribosyltransferase; SPTR: A3DKX7 Uracil phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase. (232 aa) |
| | Tagg_0359 | Cytidyltransferase-related domain protein; COGs: COG1056 Nicotinamide mononucleotide adenylyltransferase; InterPro IPR004820:IPR004821; KEGG: dac:Daci_5608 cytidyltransferase-like protein; PFAM: cytidylyltransferase; PRIAM: Nicotinamide-nucleotide adenylyltransferase; SPTR: B8D4Q4 Cytidyltransferase-related domain protein; TIGRFAM: cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: nicotinamide-nucleotide adenylyltransferase; cytidyltransferase-related domain. (182 aa) |
| | speH | Adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. (120 aa) |
| | Tagg_0388 | Pyruvate ferredoxin oxidoreductase, delta subunit; COGs: COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase delta subunit; InterPro IPR001450:IPR017900:IPR011898; KEGG: sfu:Sfum_2793 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8D475 Pyruvate synthase subunit porD; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; PFAM: 4Fe-4S binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family. (93 aa) |
| | Tagg_0389 | Pyruvate/ketoisovalerate oxidoreductase, gamma subunit; COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752:IPR011894; KEGG: sat:SYN_00157 pyruvate:ferredoxin oxidoreductase gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase; SPTR: B8D476 Pyruvate synthase subunit porC; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family. (185 aa) |
| | Tagg_0392 | 2-oxoglutarate ferredoxin oxidoreductase, beta subunit; COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: sfu:Sfum_0016 2-oxoglutarate ferredoxin oxidoreductase subunit beta; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; SPTR: B8D429 2-oxoglutarate ferredoxin oxidoreductase, beta subunit; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain. (276 aa) |
| | Tagg_0393 | COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752:IPR018202; KEGG: afw:Anae109_1896 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: Pyruvate/ketoisovalerate oxidoreductase; SPTR: B8D428 2-oxoglutarate oxidoreductase gamma subunit; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase. (177 aa) |
| | Tagg_0394 | DNA binding protein, Tfx family; COGs: COG1356 conserved hypothetical protein; InterPro IPR007630:IPR004645; PFAM: sigma-70 region 4 domain protein; SPTR: B8D4N9 Putative transcriptional regulatory protein; TIGRFAM: DNA-binding protein, Tfx family; PFAM: Sigma-70, region 4; TIGRFAM: DNA-binding protein, Tfx family. (136 aa) |
| | speE | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family. (284 aa) |
| | Tagg_0453 | Arginine--tRNA ligase; COGs: COG0018 Arginyl-tRNA synthetase; InterPro IPR015945:IPR008909; KEGG: DALR anticodon binding domain containing protein; PFAM: DALR anticodon binding domain protein; PRIAM: Arginine--tRNA ligase; SPTR: B8D3Z5 Arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (750 aa) |
| | thiL | Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. (327 aa) |
| | Tagg_0475 | COGs: COG0417 DNA polymerase elongation subunit (family B); InterPro IPR006134:IPR006172; KEGG: DNA polymerase alpha catalytic subunit; K02320 DNA polymerase alpha subunit A; PFAM: DNA polymerase B region; SMART: DNA-directed DNA polymerase B; SPTR: A3DL70 DNA polymerase B region; PFAM: DNA polymerase family B. (636 aa) |
