STRINGSTRING
sno sno PSD3 PSD3 gap-2 gap-2 T01_10277 T01_10277 SCAI SCAI ARFGAP1 ARFGAP1 soc-2 soc-2 FICD FICD RAP1GAP RAP1GAP Sipa1l2 Sipa1l2 T01_395 T01_395 Dusp7 Dusp7 Rasgrp1 Rasgrp1 SIPA1L2 SIPA1L2 RASA2 RASA2 T01_12860 T01_12860 Riok1 Riok1 Abra Abra Ralgapb Ralgapb GBF1 GBF1 Chn1 Chn1 Arfgef1 Arfgef1 Cyth3 Cyth3 DLC1 DLC1 RALGPS2 RALGPS2 FAM65C FAM65C DENND4A DENND4A Arhgef2 Arhgef2 Arhgap44 Arhgap44 TFDP1 TFDP1 aex-3 aex-3 Nf1 Nf1 IQSEC1 IQSEC1 Slc30a1 Slc30a1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
snoProtein strawberry notch. (823 aa)
PSD3PH and SEC7 domain-containing protein 3. (1124 aa)
gap-2Ras GTPase-activating protein gap-2. (1539 aa)
T01_10277Putative Rho GTPase-activating protein. (1800 aa)
SCAIProtein SCAI. (572 aa)
ARFGAP1ADP-ribosylation factor GTPase-activating protein 1. (412 aa)
soc-2Leucine-rich repeat protein soc-2. (606 aa)
FICDAdenosine monophosphate-protein transferase FICD. (1665 aa)
RAP1GAPRap1 GTPase-activating protein 1. (762 aa)
Sipa1l2Signal-induced proliferation-associated 1-like protein 2. (1403 aa)
T01_395Uncharacterized protein. (66 aa)
Dusp7Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (530 aa)
Rasgrp1Ras guanyl-releasing protein 3. (721 aa)
SIPA1L2Signal-induced proliferation-associated 1-like protein 2. (228 aa)
RASA2Ras GTPase-activating protein 3. (870 aa)
T01_12860Uncharacterized protein. (59 aa)
Riok1Serine/threonine-protein kinase RIO1. (513 aa)
AbraActin-binding Rho-activating protein. (272 aa)
RalgapbRal GTPase-activating protein subunit beta. (1402 aa)
GBF1Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1. (1990 aa)
Chn1Probable ribosome biogenesis protein T01_8816; Probable pre-rRNA processing protein involved in ribosome biogenesis. (718 aa)
Arfgef1Brefeldin A-inhibited guanine nucleotide-exchange protein 1. (1753 aa)
Cyth3Cytohesin-3; Belongs to the peptidase S1 family. (631 aa)
DLC1Rho GTPase-activating protein 7. (1391 aa)
RALGPS2Ras-specific guanine nucleotide-releasing factor RalGPS1. (670 aa)
FAM65CProtein FAM65C. (885 aa)
DENND4AC-myc promoter-binding protein. (1849 aa)
Arhgef2Rho guanine nucleotide exchange factor 2. (1274 aa)
Arhgap44Rho GTPase-activating protein 44. (762 aa)
TFDP1Transcription factor Dp-1. (441 aa)
aex-3MAP kinase-activating death domain protein. (1531 aa)
Nf1Neurofibromin. (2981 aa)
IQSEC1IQ motif and SEC7 domain-containing protein 1. (705 aa)
Slc30a1Zinc transporter 1. (407 aa)
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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