STRINGSTRING
tmed1 tmed1 sft-4 sft-4 ergic3 ergic3 SLC25A18 SLC25A18 ergic1 ergic1 T01_1840 T01_1840 Nucb2 Nucb2 ARHGAP10 ARHGAP10 SEC22B SEC22B yif1b-a yif1b-a ERGIC2 ERGIC2 TMED7 TMED7 tmed1-2 tmed1-2 sel-9 sel-9 TRAPPC5 TRAPPC5 eca eca
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tmed1Transmembrane emp24 domain-containing protein 1. (228 aa)
sft-4Surfeit locus protein 4-like protein. (277 aa)
ergic3Endoplasmic reticulum-Golgi intermediate compartment protein 3. (638 aa)
SLC25A18Mitochondrial glutamate carrier 2; Belongs to the mitochondrial carrier (TC 2.A.29) family. (333 aa)
ergic1Endoplasmic reticulum-Golgi intermediate compartment protein 1. (313 aa)
T01_1840Putative glucosamine 6-phosphate N-acetyltransferase. (511 aa)
Nucb2Nucleobindin-2. (610 aa)
ARHGAP10Rho GTPase-activating protein 10. (803 aa)
SEC22BVesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family. (215 aa)
yif1b-aProtein YIF1B-A. (309 aa)
ERGIC2Endoplasmic reticulum-Golgi intermediate compartment protein 2. (459 aa)
TMED7Transmembrane emp24 domain-containing protein 7. (205 aa)
tmed1-2Transmembrane emp24 domain-containing protein 1. (206 aa)
sel-9Suppressor/enhancer of lin-12 protein 9. (267 aa)
TRAPPC5Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (188 aa)
ecaTransmembrane emp24 domain-containing protein eca. (213 aa)
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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