STRINGSTRING
Rasgrp1 Rasgrp1 rgl1 rgl1 Sos1 Sos1 RALGPS2 RALGPS2 BCAR3 BCAR3 pxf-1-2 pxf-1-2 RAPGEF4 RAPGEF4 C3G C3G PLCB4 PLCB4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rasgrp1Ras guanyl-releasing protein 3. (721 aa)
rgl1Ral guanine nucleotide dissociation stimulator-like 1. (728 aa)
Sos1Son of sevenless-like protein 1. (1558 aa)
RALGPS2Ras-specific guanine nucleotide-releasing factor RalGPS1. (670 aa)
BCAR3Breast cancer anti-estrogen resistance protein 3. (885 aa)
pxf-1-2General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (2475 aa)
RAPGEF4Rap guanine nucleotide exchange factor 4. (1264 aa)
C3GRap guanine nucleotide exchange factor 1. (1142 aa)
PLCB4Phosphoinositide phospholipase C. (3574 aa)
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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