STRINGSTRING
HERPUD2 HERPUD2 ARHGEF1 ARHGEF1 faf2-b faf2-b ned-8 ned-8 ubxn-4 ubxn-4 EPB41L5 EPB41L5 FRMPD4 FRMPD4 ubtd1 ubtd1 DIEXF DIEXF UBL3 UBL3 ATG12 ATG12 mig-10 mig-10 FRMD6 FRMD6 Farp1 Farp1 ck ck FRMPD2 FRMPD2 Rad23b Rad23b MLLT4 MLLT4 CSRP2 CSRP2 Ubfd1 Ubfd1 rgl1 rgl1 dvl3 dvl3 Moe Moe UBI1-2 UBI1-2 Eif4a3 Eif4a3 rps30a rps30a Epb41l1 Epb41l1 UBB-4 UBB-4 Ubxn6 Ubxn6 NSFL1C NSFL1C UBXN7 UBXN7 SLC17A5-3 SLC17A5-3 FICD FICD NOTCH2 NOTCH2 PLCB4 PLCB4 Sf3a1 Sf3a1 Pik3ca Pik3ca Frmd5 Frmd5 smo-1 smo-1 phl phl RAPGEF4 RAPGEF4 tiprl tiprl T01_5758 T01_5758 UBA52 UBA52 T01_7243 T01_7243 T01_11237 T01_11237 T01_4630 T01_4630 T01_14458 T01_14458 T01_13681 T01_13681 T01_658 T01_658 T01_8431 T01_8431 UBB UBB UBB-2 UBB-2 UBA52-2 UBA52-2 UBA52-3 UBA52-3 T01_7961 T01_7961 UBB-3 UBB-3 Ptpn14 Ptpn14 T01_4213 T01_4213 T01_16227 T01_16227 UBI1 UBI1 PLEKHG5 PLEKHG5 T01_3979 T01_3979 axin1 axin1 MRPS35 MRPS35 Frmd4a Frmd4a T01_3909 T01_3909 T01_3840 T01_3840 USP14 USP14 T01_466 T01_466 Slc26a6 Slc26a6 TBCB TBCB UBA52-4 UBA52-4 lgg-1 lgg-1 BAG1 BAG1 Taok1 Taok1 ptp-1-2 ptp-1-2 MAN2C1 MAN2C1 Rassf1 Rassf1 RASSF7 RASSF7 RUB1 RUB1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HERPUD2Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein. (431 aa)
ARHGEF1Rho guanine nucleotide exchange factor 12. (1614 aa)
faf2-bFAS-associated factor 2-B. (438 aa)
ned-8Nedd8. (81 aa)
ubxn-4UBX domain-containing protein 4. (448 aa)
EPB41L5Band 4.1-like protein 5. (648 aa)
FRMPD4FERM and PDZ domain-containing protein 4. (731 aa)
ubtd1Ubiquitin domain-containing protein 1. (299 aa)
DIEXFDigestive organ expansion factor-like protein. (766 aa)
UBL3Ubiquitin-like protein 3. (232 aa)
ATG12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (139 aa)
mig-10Abnormal cell migration protein 10. (890 aa)
FRMD6FERM domain-containing protein. (1273 aa)
Farp1FERM, RhoGEF and pleckstrin domain-containing protein 1. (860 aa)
ckMyosin-VIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2138 aa)
FRMPD2FERM and PDZ domain-containing protein 2. (1478 aa)
Rad23bUV excision repair protein RAD23-like protein B. (506 aa)
MLLT4Afadin. (1849 aa)
CSRP2Cysteine and glycine-rich protein 2. (660 aa)
Ubfd1Ubiquitin domain-containing protein UBFD1. (598 aa)
rgl1Ral guanine nucleotide dissociation stimulator-like 1. (728 aa)
dvl3Segment polarity protein dishevelled-like protein DVL-3. (702 aa)
MoeMoesin/ezrin/radixin-like protein 1. (628 aa)
UBI1-2Polyubiquitin. (762 aa)
Eif4a3Eukaryotic initiation factor 4A-III. (1082 aa)
rps30a40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (139 aa)
Epb41l1Band 4.1-like protein 1. (683 aa)
UBB-4Polyubiquitin-B. (229 aa)
Ubxn6UBX domain-containing protein 6. (352 aa)
NSFL1CNSFL1 cofactor p47. (810 aa)
UBXN7UBX domain-containing protein 7. (451 aa)
SLC17A5-3Tubulin-specific chaperone E. (640 aa)
FICDAdenosine monophosphate-protein transferase FICD. (1665 aa)
NOTCH2Neurogenic locus notch-like protein 2. (1336 aa)
PLCB4Phosphoinositide phospholipase C. (3574 aa)
Sf3a1Splicing factor 3A subunit 1. (1031 aa)
Pik3caPhosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; Belongs to the PI3/PI4-kinase family. (1297 aa)
Frmd5FERM domain-containing protein 3. (670 aa)
smo-1Small ubiquitin-related modifier; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (620 aa)
phlSerine/threonine-protein kinase B-raf. (804 aa)
RAPGEF4Rap guanine nucleotide exchange factor 4. (1264 aa)
tiprlTIP41-like protein. (2469 aa)
T01_5758Polyubiquitin-like protein. (47 aa)
UBA52Ubiquitin-60S ribosomal protein L40. (46 aa)
T01_7243Polyubiquitin-like protein. (49 aa)
T01_11237Polyubiquitin-like protein. (68 aa)
T01_4630Polyubiquitin-like protein. (85 aa)
T01_14458Polyubiquitin-like protein. (74 aa)
T01_13681Polyubiquitin-like protein. (75 aa)
T01_658Polyubiquitin-like protein. (101 aa)
T01_8431Polyubiquitin-like protein. (110 aa)
UBBPolyubiquitin-B. (126 aa)
UBB-2Polyubiquitin-B. (194 aa)
UBA52-2Ubiquitin-60S ribosomal protein L40. (74 aa)
UBA52-3Ubiquitin-60S ribosomal protein L40. (62 aa)
T01_7961Polyubiquitin. (534 aa)
UBB-3Polyubiquitin-B. (159 aa)
Ptpn14Tyrosine-protein phosphatase non-receptor type 14. (592 aa)
T01_4213Ubiquitin. (69 aa)
T01_16227Polyubiquitin. (455 aa)
UBI1Polyubiquitin. (70 aa)
PLEKHG5Pleckstrin homology domain-containing family G member 5. (1293 aa)
T01_3979Ubiquitin-like domain-containing protein. (330 aa)
axin1Axin-1. (1107 aa)
MRPS3528S ribosomal protein S35, mitochondrial. (1164 aa)
Frmd4aFERM domain-containing protein 4A. (997 aa)
T01_3909Polyubiquitin-like protein. (50 aa)
T01_3840FERM domain-containing protein. (286 aa)
USP14Ubiquitin carboxyl-terminal hydrolase. (530 aa)
T01_466Ubiquitin-fold modifier 1; Ubiquitin-like modifier. (92 aa)
Slc26a6Solute carrier family 26 member 6. (900 aa)
TBCBTubulin-folding cofactor B. (205 aa)
UBA52-4Ubiquitin-60S ribosomal protein L40. (137 aa)
lgg-1Protein lgg-1. (148 aa)
BAG1BAG family molecular chaperone regulator 1. (199 aa)
Taok1Serine/threonine-protein kinase SULU; Belongs to the PI3/PI4-kinase family. (3066 aa)
ptp-1-2Tyrosine-protein phosphatase 1. (1045 aa)
MAN2C1Alpha-mannosidase 2C1. (1057 aa)
Rassf1Ras association domain-containing protein 1. (429 aa)
RASSF7Ras association domain-containing protein 7. (395 aa)
RUB1Nedd8-like protein RUB1. (186 aa)
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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