24 items (Trichinella spiralis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PDZD8	PDZ domain-containing protein 8. (1046 aa)
	ARHGEF1	Rho guanine nucleotide exchange factor 12. (1614 aa)
	Arhgef2	Rho guanine nucleotide exchange factor 2. (1274 aa)
	dgk-3	Diacylglycerol kinase. (854 aa)
	Rassf1	Ras association domain-containing protein 1. (429 aa)
	PGBD3-15	PiggyBac transposable element-derived protein 3. (147 aa)
	KSR2	Kinase suppressor of Ras 2. (983 aa)
	Dgke	Diacylglycerol kinase. (1029 aa)
	Prim1	DNA primase small subunit. (1322 aa)
	pkc-1	Protein kinase C-like 1B; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1254 aa)
	Gtf2h2	General transcription factor IIH subunit. (392 aa)
	pkc-2	Protein kinase C-like 2; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (738 aa)
	phl	Serine/threonine-protein kinase B-raf. (804 aa)
	tpa-1	Protein kinase C-like 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (790 aa)
	Rasgrp1	Ras guanyl-releasing protein 3. (721 aa)
	T01_12178	Phorbol-ester/DAG-type domain-containing protein. (306 aa)
	hmha1	Minor histocompatibility protein HA-1. (968 aa)
	dkf-1	Serine/threonine-protein kinase dkf-1. (749 aa)
	unc-13	Phorbol ester/diacylglycerol-binding protein unc-13. (1808 aa)
	Chn1	Probable ribosome biogenesis protein T01_8816; Probable pre-rRNA processing protein involved in ribosome biogenesis. (718 aa)
	pkc-3	Protein kinase C-like 3. (648 aa)
	ROCK2	Rho-associated protein kinase 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1408 aa)
	Cdc42bpb	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1775 aa)
	dkf-2	Serine/threonine-protein kinase dkf-2. (882 aa)

Your Current Organism:

Trichinella spiralis

NCBI taxonomy Id: 6334
Other names: T. spiralis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARHGEF1	Arhgef2	A0A0V1BR12	A0A0V1BTS4	Rho guanine nucleotide exchange factor 12.	Rho guanine nucleotide exchange factor 2.	0.582
ARHGEF1	Cdc42bpb	A0A0V1BR12	A0A0V1BIN1	Rho guanine nucleotide exchange factor 12.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.623
ARHGEF1	ROCK2	A0A0V1BR12	A0A0V1BHT3	Rho guanine nucleotide exchange factor 12.	Rho-associated protein kinase 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.623
Arhgef2	ARHGEF1	A0A0V1BTS4	A0A0V1BR12	Rho guanine nucleotide exchange factor 2.	Rho guanine nucleotide exchange factor 12.	0.582
Cdc42bpb	ARHGEF1	A0A0V1BIN1	A0A0V1BR12	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	Rho guanine nucleotide exchange factor 12.	0.623
KSR2	phl	A0A0V1BXS1	A0A0V1AX29	Kinase suppressor of Ras 2.	Serine/threonine-protein kinase B-raf.	0.843
ROCK2	ARHGEF1	A0A0V1BHT3	A0A0V1BR12	Rho-associated protein kinase 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	Rho guanine nucleotide exchange factor 12.	0.623
phl	KSR2	A0A0V1AX29	A0A0V1BXS1	Serine/threonine-protein kinase B-raf.	Kinase suppressor of Ras 2.	0.843
pkc-1	pkc-2	A0A0V1C1W7	A0A0V1AV38	Protein kinase C-like 1B; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	Protein kinase C-like 2; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.613
pkc-2	pkc-1	A0A0V1AV38	A0A0V1C1W7	Protein kinase C-like 2; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	Protein kinase C-like 1B; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.613
pkc-2	tpa-1	A0A0V1AV38	A0A0V1B236	Protein kinase C-like 2; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	Protein kinase C-like 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.613
tpa-1	pkc-2	A0A0V1B236	A0A0V1AV38	Protein kinase C-like 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	Protein kinase C-like 2; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.613