STRINGSTRING
mig-10 mig-10 FNDC3B FNDC3B RAPGEF4 RAPGEF4 Pdpk1 Pdpk1 sem-5 sem-5 rap-1 rap-1 Bcar1 Bcar1 TLN1 TLN1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mig-10Abnormal cell migration protein 10. (890 aa)
FNDC3BFibronectin type III domain-containing protein 3B. (1789 aa)
RAPGEF4Rap guanine nucleotide exchange factor 4. (1264 aa)
Pdpk13-phosphoinositide-dependent protein kinase 1. (535 aa)
sem-5Sex muscle abnormal protein 5. (231 aa)
rap-1Ras-related protein Rap-1. (185 aa)
Bcar1Breast cancer anti-estrogen resistance protein 1. (1127 aa)
TLN1Talin-1. (2596 aa)
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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