STRINGSTRING
Ggamma1 Ggamma1 COPZ1 COPZ1 arf-1.2 arf-1.2 T01_7299 T01_7299 stx18 stx18 Arl5b Arl5b mec-12-2 mec-12-2 mec-12-3 mec-12-3 COPE COPE Napa Napa mec-12-4 mec-12-4 Kif13a Kif13a sft-4 sft-4 osm-3 osm-3 T01_10519 T01_10519 KdelR KdelR KIF4A KIF4A eca eca sel-9 sel-9 KIF18B KIF18B GBF1 GBF1 KIF15 KIF15 SEC22B SEC22B NBAS NBAS Ttc19 Ttc19 KIF2A KIF2A unc-104 unc-104 mec-12 mec-12 YPT1 YPT1 T01_1863 T01_1863 ARCN1 ARCN1 comt comt T01_1044 T01_1044 Arfgap3 Arfgap3 COPA COPA RINT1 RINT1 ARFGAP1 ARFGAP1 ZW10 ZW10 KIF23 KIF23 Copb2 Copb2 Use1 Use1 T01_14624 T01_14624 COPB1 COPB1 T01_6095 T01_6095 Kif26a Kif26a kdelr2 kdelr2 copg2 copg2 arf4 arf4 RAB1A RAB1A KIF23-2 KIF23-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ggamma1Guanine nucleotide-binding protein subunit gamma-1. (73 aa)
COPZ1Coatomer subunit zeta-1. (860 aa)
arf-1.2ADP-ribosylation factor 1-like 2. (580 aa)
T01_7299Uncharacterized protein. (550 aa)
stx18Syntaxin-18. (359 aa)
Arl5bADP-ribosylation factor-like protein 5B; Belongs to the small GTPase superfamily. Arf family. (155 aa)
mec-12-2Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (476 aa)
mec-12-3Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (470 aa)
COPECoatomer subunit epsilon. (336 aa)
NapaAlpha-soluble NSF attachment protein. (269 aa)
mec-12-4Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
Kif13aKinesin-like protein KIF13A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1480 aa)
sft-4Surfeit locus protein 4-like protein. (277 aa)
osm-3Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (781 aa)
T01_10519Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (700 aa)
KdelRER lumen protein-retaining receptor. (212 aa)
KIF4AChromosome-associated kinesin KIF4A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1018 aa)
ecaTransmembrane emp24 domain-containing protein eca. (213 aa)
sel-9Suppressor/enhancer of lin-12 protein 9. (267 aa)
KIF18BKinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (518 aa)
GBF1Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1. (1990 aa)
KIF15Kinesin-like protein KIF15; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1492 aa)
SEC22BVesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family. (215 aa)
NBASNeuroblastoma-amplified sequence. (2654 aa)
Ttc19Tetratricopeptide repeat protein 19, mitochondrial. (381 aa)
KIF2AKinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (684 aa)
unc-104Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1763 aa)
mec-12Tubulin alpha-3 chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (649 aa)
YPT1Ras-like GTP-binding protein YPT1. (587 aa)
T01_1863Kinesin heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1126 aa)
ARCN1Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (541 aa)
comtVesicle-fusing ATPase 1. (741 aa)
T01_1044Kinesin light chain. (610 aa)
Arfgap3ADP-ribosylation factor GTPase-activating protein 3. (548 aa)
COPACoatomer subunit alpha. (1305 aa)
RINT1RAD50-interacting protein 1. (781 aa)
ARFGAP1ADP-ribosylation factor GTPase-activating protein 1. (412 aa)
ZW10Centromere/kinetochore protein zw10-like protein. (750 aa)
KIF23Kinesin-like protein KIF23; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (803 aa)
Copb2Coatomer subunit beta. (2181 aa)
Use1Vesicle transport protein USE1. (248 aa)
T01_14624Uncharacterized protein. (163 aa)
COPB1Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (966 aa)
T01_6095Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
Kif26aKinesin-like protein KIF26A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1963 aa)
kdelr2ER lumen protein retaining receptor 2. (273 aa)
copg2Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (1026 aa)
arf4ADP-ribosylation factor 4; Belongs to the small GTPase superfamily. Arf family. (194 aa)
RAB1ARas-related protein Rab-1A. (204 aa)
KIF23-2Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (790 aa)
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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