41 items (Trichinella spiralis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	twk-7	Actin-related protein 3; Belongs to the actin family. (1100 aa)
	sax-3	Protein sax-3. (1376 aa)
	Neo1	Neogenin-like protein. (1569 aa)
	CDON	Cell adhesion related protein. (801 aa)
	OPCML	Neurotrimin. (513 aa)
	Ptp10D	Tyrosine-protein phosphatase 10D. (605 aa)
	HCFC1	Host cell factor 1. (902 aa)
	Igf1r	Tyrosine-protein kinase receptor. (1623 aa)
	rig-4	Protein sidekick-like protein. (3267 aa)
	CDON-2	Zinc transporter 5. (1385 aa)
	DSCAML1	Down syndrome cell adhesion molecule-like protein 1. (1215 aa)
	Bzrap1	Peripheral-type benzodiazepine receptor-associated protein 1. (1395 aa)
	Col15a1	Collagen alpha-1(XV) chain. (1800 aa)
	TRIM9	Protein dispatched-like protein 1. (2449 aa)
	PRTG	Protogenin. (1315 aa)
	NDNF	Protein NDNF. (1477 aa)
	RET	Fibroblast growth factor receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. (869 aa)
	sls	Titin. (15913 aa)
	ptp-3	Tyrosine-protein phosphatase Lar-like. (2112 aa)
	LRRN2	Leucine-rich repeat neuronal protein 2. (746 aa)
	Nphs1	Nephrin. (1409 aa)
	PTPRA	Receptor-type tyrosine-protein phosphatase alpha. (1350 aa)
	rol-3	Acylphosphatase; Belongs to the acylphosphatase family. (2722 aa)
	unc-22	Twitchin. (6358 aa)
	jac-1	Juxtamembrane domain-associated catenin. (1455 aa)
	unc-89-2	Muscle M-line assembly protein unc-89. (7274 aa)
	unc-89-3	Muscle M-line assembly protein unc-89. (863 aa)
	LRRN1	Leucine-rich repeat neuronal protein 1. (714 aa)
	epha4-a	Ephrin type-A receptor 4-A. (1250 aa)
	ANKFN1	Ankyrin repeat and fibronectin type-III domain-containing protein 1. (1192 aa)
	dig-1	Mesocentin. (3191 aa)
	CNTN4	Contactin-4. (1198 aa)
	C25G4.10	Ig-like and fibronectin type-III domain-containing protein C25G4.10. (1544 aa)
	FNDC3B	Fibronectin type III domain-containing protein 3B. (1789 aa)
	tutl	Protein turtle. (947 aa)
	insr	Tyrosine-protein kinase receptor. (1576 aa)
	Ncam1	Neural cell adhesion molecule 1. (929 aa)
	Nrg-2	Neuroglian. (1412 aa)
	Ptprq	Phosphatidylinositol phosphatase PTPRQ. (4931 aa)
	C25G4.10-2	Ig-like and fibronectin type-III domain-containing protein C25G4.10. (586 aa)
	CDON-3	Zinc transporter 5. (1385 aa)

Your Current Organism:

Trichinella spiralis

NCBI taxonomy Id: 6334
Other names: T. spiralis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C25G4.10	unc-89-2	A0A0V1BR45	A0A0V1BHN5	Ig-like and fibronectin type-III domain-containing protein C25G4.10.	Muscle M-line assembly protein unc-89.	0.580
C25G4.10	unc-89-3	A0A0V1BR45	A0A0V1BI10	Ig-like and fibronectin type-III domain-containing protein C25G4.10.	Muscle M-line assembly protein unc-89.	0.580
CNTN4	Nrg-2	A0A0V1BQX1	A0A0V1C133	Contactin-4.	Neuroglian.	0.736
DSCAML1	Nrg-2	A0A0V1B6F9	A0A0V1C133	Down syndrome cell adhesion molecule-like protein 1.	Neuroglian.	0.543
DSCAML1	rig-4	A0A0V1B6F9	A0A0V1B110	Down syndrome cell adhesion molecule-like protein 1.	Protein sidekick-like protein.	0.412
Igf1r	PTPRA	A0A0V1AZ68	A0A0V1BEZ9	Tyrosine-protein kinase receptor.	Receptor-type tyrosine-protein phosphatase alpha.	0.434
Igf1r	ptp-3	A0A0V1AZ68	A0A0V1BCC0	Tyrosine-protein kinase receptor.	Tyrosine-protein phosphatase Lar-like.	0.606
Igf1r	unc-89-2	A0A0V1AZ68	A0A0V1BHN5	Tyrosine-protein kinase receptor.	Muscle M-line assembly protein unc-89.	0.654
Igf1r	unc-89-3	A0A0V1AZ68	A0A0V1BI10	Tyrosine-protein kinase receptor.	Muscle M-line assembly protein unc-89.	0.654
Neo1	Ptprq	A0A0V1AXN4	A0A0V1C1E7	Neogenin-like protein.	Phosphatidylinositol phosphatase PTPRQ.	0.672
Neo1	TRIM9	A0A0V1AXN4	A0A0V1B9G4	Neogenin-like protein.	Protein dispatched-like protein 1.	0.719
Neo1	sax-3	A0A0V1AXN4	A0A0V1AXM0	Neogenin-like protein.	Protein sax-3.	0.682
Nrg-2	CNTN4	A0A0V1C133	A0A0V1BQX1	Neuroglian.	Contactin-4.	0.736
Nrg-2	DSCAML1	A0A0V1C133	A0A0V1B6F9	Neuroglian.	Down syndrome cell adhesion molecule-like protein 1.	0.543
PTPRA	Igf1r	A0A0V1BEZ9	A0A0V1AZ68	Receptor-type tyrosine-protein phosphatase alpha.	Tyrosine-protein kinase receptor.	0.434
PTPRA	insr	A0A0V1BEZ9	A0A0V1BWA2	Receptor-type tyrosine-protein phosphatase alpha.	Tyrosine-protein kinase receptor.	0.434
Ptp10D	rol-3	A0A0V1AXZ3	A0A0V1BFY2	Tyrosine-protein phosphatase 10D.	Acylphosphatase; Belongs to the acylphosphatase family.	0.549
Ptprq	Neo1	A0A0V1C1E7	A0A0V1AXN4	Phosphatidylinositol phosphatase PTPRQ.	Neogenin-like protein.	0.672
TRIM9	Neo1	A0A0V1B9G4	A0A0V1AXN4	Protein dispatched-like protein 1.	Neogenin-like protein.	0.719
epha4-a	ptp-3	A0A0V1BIT3	A0A0V1BCC0	Ephrin type-A receptor 4-A.	Tyrosine-protein phosphatase Lar-like.	0.402