STRINGSTRING
Sos1 Sos1 rgl1 rgl1 RAPGEF4 RAPGEF4 C3G C3G Rasgrp1 Rasgrp1 PLCB4 PLCB4 pxf-1-2 pxf-1-2 RALGPS2 RALGPS2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sos1Son of sevenless-like protein 1. (1558 aa)
rgl1Ral guanine nucleotide dissociation stimulator-like 1. (728 aa)
RAPGEF4Rap guanine nucleotide exchange factor 4. (1264 aa)
C3GRap guanine nucleotide exchange factor 1. (1142 aa)
Rasgrp1Ras guanyl-releasing protein 3. (721 aa)
PLCB4Phosphoinositide phospholipase C. (3574 aa)
pxf-1-2General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (2475 aa)
RALGPS2Ras-specific guanine nucleotide-releasing factor RalGPS1. (670 aa)
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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