STRINGSTRING
SDH08506.1 SDH08506.1 SDM76809.1 SDM76809.1 SDM51114.1 SDM51114.1 SDM45591.1 SDM45591.1 SDK64884.1 SDK64884.1 SDK32201.1 SDK32201.1 SDK29945.1 SDK29945.1 SDJ97282.1 SDJ97282.1 SDJ77307.1 SDJ77307.1 SDJ57603.1 SDJ57603.1 SDJ20020.1 SDJ20020.1 SDI98240.1 SDI98240.1 SDI97570.1 SDI97570.1 SDI42197.1 SDI42197.1 SDH05967.1 SDH05967.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDH08506.1Hypothetical protein. (386 aa)
SDM76809.1Right handed beta helix region. (711 aa)
SDM51114.1F5/8 type C domain-containing protein. (1204 aa)
SDM45591.1Pectate lyase. (316 aa)
SDK64884.1Pectate lyase. (478 aa)
SDK32201.1Pectate lyase. (258 aa)
SDK29945.1Right handed beta helix region. (571 aa)
SDJ97282.1Polygalacturonase; Belongs to the glycosyl hydrolase 28 family. (465 aa)
SDJ77307.1Hypothetical protein. (417 aa)
SDJ57603.1CARDB protein. (1089 aa)
SDJ20020.1Ricin-type beta-trefoil lectin domain-containing protein. (791 aa)
SDI98240.1Fibronectin type III domain-containing protein. (2204 aa)
SDI97570.1Hypothetical protein. (421 aa)
SDI42197.1Hypothetical protein. (630 aa)
SDH05967.1Pectate lyase superfamily protein. (670 aa)
Your Current Organism:
Nonomuraea jiangxiensis
NCBI taxonomy Id: 633440
Other names: CGMCC 4.6533, N. jiangxiensis, NBRC 106679, Nonomuraea jiangxiensis Li et al. 2012, Nonomuraea sp. FXJ1.102, strain FXJ1.102
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