(24 nodes) Low-density lipoprotein (LDL) receptor class A repeat network (Trichinella nativa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Corin	Low-density lipoprotein receptor-related protein 1B. (1254 aa)
	SORL1	Sortilin-related receptor. (694 aa)
	Plg-2	Plasminogen. (868 aa)
	T02_7997	MANSC domain-containing protein. (377 aa)
	Lrp2	Low-density lipoprotein receptor-related protein 2. (961 aa)
	mua-3	Transmembrane cell adhesion receptor mua-3. (3540 aa)
	OVCH1-2	Ovochymase-1. (599 aa)
	T02_1282	Very low-density lipoprotein receptor. (939 aa)
	NETO2	Neuropilin and tolloid-like protein 2. (711 aa)
	PLG-4	Plasminogen. (728 aa)
	PRKCSH	Glucosidase 2 subunit beta. (554 aa)
	lrp-1	Low-density lipoprotein receptor-related protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (5316 aa)
	Angptl1	Angiopoietin-related protein 1. (611 aa)
	Alk	Tyrosine-protein kinase receptor. (1277 aa)
	T02_7291	Low-density lipoprotein receptor-related protein. (692 aa)
	LRP6	Low-density lipoprotein receptor-related protein 6. (1712 aa)
	EGF1-2	Fibropellin-1. (3603 aa)
	T02_14330	Uncharacterized protein. (370 aa)
	LRP1	Prolow-density lipoprotein receptor-related protein 1. (5139 aa)
	Cubn	Cubilin. (879 aa)
	Prss12	Neurotrypsin; Belongs to the peptidase S1 family. (1040 aa)
	T02_1468	Uncharacterized protein. (398 aa)
	T02_7615	Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (976 aa)
	HSPG2	Basement membrane proteoglycan. (2895 aa)

Your Current Organism:

Trichinella nativa

NCBI taxonomy Id: 6335
Other names: T. nativa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Alk	Corin	A0A0V1L8K5	A0A0V1L1U7	Tyrosine-protein kinase receptor.	Low-density lipoprotein receptor-related protein 1B.	0.675
Alk	Cubn	A0A0V1L8K5	A0A0V1L1V2	Tyrosine-protein kinase receptor.	Cubilin.	0.446
Alk	EGF1-2	A0A0V1L8K5	A0A0V1L4Z7	Tyrosine-protein kinase receptor.	Fibropellin-1.	0.638
Alk	OVCH1-2	A0A0V1L8K5	A0A0V1LEL1	Tyrosine-protein kinase receptor.	Ovochymase-1.	0.571
Alk	PLG-4	A0A0V1L8K5	A0A0V1LCS4	Tyrosine-protein kinase receptor.	Plasminogen.	0.571
Alk	Plg-2	A0A0V1L8K5	A0A0V1LR82	Tyrosine-protein kinase receptor.	Plasminogen.	0.571
Alk	Prss12	A0A0V1L8K5	A0A0V1L1M7	Tyrosine-protein kinase receptor.	Neurotrypsin; Belongs to the peptidase S1 family.	0.571
Alk	T02_14330	A0A0V1L8K5	A0A0V1L4H3	Tyrosine-protein kinase receptor.	Uncharacterized protein.	0.543
Angptl1	Corin	A0A0V1L8Z9	A0A0V1L1U7	Angiopoietin-related protein 1.	Low-density lipoprotein receptor-related protein 1B.	0.552
Angptl1	EGF1-2	A0A0V1L8Z9	A0A0V1L4Z7	Angiopoietin-related protein 1.	Fibropellin-1.	0.703
Corin	Alk	A0A0V1L1U7	A0A0V1L8K5	Low-density lipoprotein receptor-related protein 1B.	Tyrosine-protein kinase receptor.	0.675
Corin	Angptl1	A0A0V1L1U7	A0A0V1L8Z9	Low-density lipoprotein receptor-related protein 1B.	Angiopoietin-related protein 1.	0.552
Corin	EGF1-2	A0A0V1L1U7	A0A0V1L4Z7	Low-density lipoprotein receptor-related protein 1B.	Fibropellin-1.	0.711
Corin	LRP1	A0A0V1L1U7	A0A0V1L3G8	Low-density lipoprotein receptor-related protein 1B.	Prolow-density lipoprotein receptor-related protein 1.	0.790
Corin	LRP6	A0A0V1L1U7	A0A0V1L5E4	Low-density lipoprotein receptor-related protein 1B.	Low-density lipoprotein receptor-related protein 6.	0.790
Corin	Lrp2	A0A0V1L1U7	A0A0V1LT34	Low-density lipoprotein receptor-related protein 1B.	Low-density lipoprotein receptor-related protein 2.	0.809
Corin	T02_1282	A0A0V1L1U7	A0A0V1LFU4	Low-density lipoprotein receptor-related protein 1B.	Very low-density lipoprotein receptor.	0.790
Corin	T02_7291	A0A0V1L1U7	A0A0V1L5Z9	Low-density lipoprotein receptor-related protein 1B.	Low-density lipoprotein receptor-related protein.	0.790
Corin	T02_7615	A0A0V1L1U7	A0A0V1KX37	Low-density lipoprotein receptor-related protein 1B.	Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.	0.790
Corin	lrp-1	A0A0V1L1U7	A0A0V1LAG3	Low-density lipoprotein receptor-related protein 1B.	Low-density lipoprotein receptor-related protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.790