(28 nodes) Calcium-binding EGF-like domain network (Trichinella nativa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mup-4	Transmembrane matrix receptor MUP-4. (2562 aa)
	stan	Protocadherin-like wing polarity protein stan; Belongs to the G-protein coupled receptor 2 family. (2714 aa)
	Dl	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (837 aa)
	N	Neurogenic locus Notch protein. (296 aa)
	EGF1	Fibropellin-1. (833 aa)
	LRP1	Prolow-density lipoprotein receptor-related protein 1. (5139 aa)
	EGF1-2	Fibropellin-1. (3603 aa)
	mab-7	Protein male abnormal 7. (609 aa)
	T02_7291	Low-density lipoprotein receptor-related protein. (692 aa)
	fbl-1	Fibulin-1. (917 aa)
	T02_5772	EGF-like domain-containing protein. (962 aa)
	Nid1	Nidogen-1. (1694 aa)
	lrp-1	Low-density lipoprotein receptor-related protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (5316 aa)
	NOTCH2	Neurogenic locus notch-like protein 2. (684 aa)
	crb	Uncharacterized protein. (1888 aa)
	T02_1282	Very low-density lipoprotein receptor. (939 aa)
	EGF1-3	Fibropellin-1. (1072 aa)
	tll1	Metalloendopeptidase. (1290 aa)
	Megf6	Multiple epidermal growth factor-like domains protein 6. (1604 aa)
	CUBN	Cubilin. (3817 aa)
	ft-3	Cadherin-related tumor suppressor. (2807 aa)
	T02_11231	Latent-transforming growth factor beta-binding protein 2. (2026 aa)
	creld2	ATP-dependent RNA helicase SUPV3L1, mitochondrial. (1593 aa)
	T02_10845	EGF-like domain-containing protein. (1930 aa)
	NPNT	Nephronectin. (753 aa)
	N-3	Neurogenic locus Notch protein. (2656 aa)
	scube2	Signal peptide, CUB and EGF-like domain-containing protein 2. (1660 aa)
	mua-3	Transmembrane cell adhesion receptor mua-3. (3540 aa)

Your Current Organism:

Trichinella nativa

NCBI taxonomy Id: 6335
Other names: T. nativa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUBN	tll1	A0A0V1LJ67	A0A0V1LH03	Cubilin.	Metalloendopeptidase.	0.583
Dl	EGF1-2	A0A0V1KTZ1	A0A0V1L4Z7	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Fibropellin-1.	0.572
EGF1-2	Dl	A0A0V1L4Z7	A0A0V1KTZ1	Fibropellin-1.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.572
EGF1-2	Nid1	A0A0V1L4Z7	A0A0V1L770	Fibropellin-1.	Nidogen-1.	0.609
EGF1-2	crb	A0A0V1L4Z7	A0A0V1LEW7	Fibropellin-1.	Uncharacterized protein.	0.418
LRP1	Megf6	A0A0V1L3G8	A0A0V1LI50	Prolow-density lipoprotein receptor-related protein 1.	Multiple epidermal growth factor-like domains protein 6.	0.422
Megf6	LRP1	A0A0V1LI50	A0A0V1L3G8	Multiple epidermal growth factor-like domains protein 6.	Prolow-density lipoprotein receptor-related protein 1.	0.422
Megf6	Nid1	A0A0V1LI50	A0A0V1L770	Multiple epidermal growth factor-like domains protein 6.	Nidogen-1.	0.680
Megf6	T02_1282	A0A0V1LI50	A0A0V1LFU4	Multiple epidermal growth factor-like domains protein 6.	Very low-density lipoprotein receptor.	0.422
Megf6	T02_7291	A0A0V1LI50	A0A0V1L5Z9	Multiple epidermal growth factor-like domains protein 6.	Low-density lipoprotein receptor-related protein.	0.422
Megf6	lrp-1	A0A0V1LI50	A0A0V1LAG3	Multiple epidermal growth factor-like domains protein 6.	Low-density lipoprotein receptor-related protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.422
Nid1	EGF1-2	A0A0V1L770	A0A0V1L4Z7	Nidogen-1.	Fibropellin-1.	0.609
Nid1	Megf6	A0A0V1L770	A0A0V1LI50	Nidogen-1.	Multiple epidermal growth factor-like domains protein 6.	0.680
T02_1282	Megf6	A0A0V1LFU4	A0A0V1LI50	Very low-density lipoprotein receptor.	Multiple epidermal growth factor-like domains protein 6.	0.422
T02_7291	Megf6	A0A0V1L5Z9	A0A0V1LI50	Low-density lipoprotein receptor-related protein.	Multiple epidermal growth factor-like domains protein 6.	0.422
crb	EGF1-2	A0A0V1LEW7	A0A0V1L4Z7	Uncharacterized protein.	Fibropellin-1.	0.418
lrp-1	Megf6	A0A0V1LAG3	A0A0V1LI50	Low-density lipoprotein receptor-related protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Multiple epidermal growth factor-like domains protein 6.	0.422
tll1	CUBN	A0A0V1LH03	A0A0V1LJ67	Metalloendopeptidase.	Cubilin.	0.583