(32 nodes) Respiratory electron transport chain network (Trichinella nelsoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T07_13159	Uncharacterized protein. (113 aa)
	COX4I1	Mitochondrial cytochrome c oxidase subunit. (186 aa)
	UQCRB	Cytochrome b-c1 complex subunit 7. (131 aa)
	SLC25A18	Mitochondrial glutamate carrier 2; Belongs to the mitochondrial carrier (TC 2.A.29) family. (335 aa)
	NDUFA8	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8. (193 aa)
	F42A8.1	Uncharacterized protein. (356 aa)
	nduf-6	Putative NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial. (188 aa)
	Cox5b	Cytochrome c oxidase subunit 5B, mitochondrial. (116 aa)
	C50B8.3	Putative complex I intermediate-associated protein 30, mitochondrial. (325 aa)
	NDUFS4	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial. (500 aa)
	NDUFS3	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial; Belongs to the complex I 30 kDa subunit family. (269 aa)
	NDUFA5	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5. (117 aa)
	CYC1	Cytochrome c1, heme protein, mitochondrial. (314 aa)
	T07_12972	Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit of the SDH catalytic dimer. (212 aa)
	NDUFA13	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13. (177 aa)
	mev-1	Succinate dehydrogenase cytochrome b560 subunit, mitochondrial. (185 aa)
	Ndufa7	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7. (150 aa)
	Uqcrh	Cytochrome b-c1 complex subunit 6, mitochondrial. (443 aa)
	sdhd-1	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family. (185 aa)
	K02F3.2	Putative calcium-binding mitochondrial carrier K02F3.2; Belongs to the mitochondrial carrier (TC 2.A.29) family. (756 aa)
	NDUFV1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. (474 aa)
	sdhb-1	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). (680 aa)
	NDUFA2	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2. (244 aa)
	COX5B	Cytochrome c oxidase subunit 5B, mitochondrial. (119 aa)
	T07_12879	Uncharacterized protein. (141 aa)
	F42A8.1-2	Uncharacterized protein. (364 aa)
	sdha-1	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). (863 aa)
	ND42	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial. (427 aa)
	let-721	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial. (764 aa)
	NDUFS1	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial. (751 aa)
	cco-2	Cytochrome c oxidase subunit 5A, mitochondrial. (186 aa)
	SYP	Cytochrome b-c1 complex subunit Rieske, mitochondrial. (1225 aa)

Your Current Organism:

Trichinella nelsoni

NCBI taxonomy Id: 6336
Other names: T. nelsoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C50B8.3	ND42	A0A0V0RQ41	A0A0V0SFL0	Putative complex I intermediate-associated protein 30, mitochondrial.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial.	0.805
C50B8.3	NDUFA13	A0A0V0RQ41	A0A0V0S230	Putative complex I intermediate-associated protein 30, mitochondrial.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13.	0.996
C50B8.3	NDUFA2	A0A0V0RQ41	A0A0V0SA89	Putative complex I intermediate-associated protein 30, mitochondrial.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2.	0.757
C50B8.3	NDUFA5	A0A0V0RQ41	A0A0V0RR71	Putative complex I intermediate-associated protein 30, mitochondrial.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5.	0.770
C50B8.3	NDUFA8	A0A0V0RQ41	A0A0V0RKE3	Putative complex I intermediate-associated protein 30, mitochondrial.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8.	0.958
C50B8.3	NDUFS1	A0A0V0RQ41	A0A0V0SI17	Putative complex I intermediate-associated protein 30, mitochondrial.	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial.	0.992
C50B8.3	NDUFS3	A0A0V0RQ41	A0A0V0RR16	Putative complex I intermediate-associated protein 30, mitochondrial.	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial; Belongs to the complex I 30 kDa subunit family.	0.993
C50B8.3	NDUFS4	A0A0V0RQ41	A0A0V0RQA0	Putative complex I intermediate-associated protein 30, mitochondrial.	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial.	0.796
C50B8.3	NDUFV1	A0A0V0RQ41	A0A0V0S776	Putative complex I intermediate-associated protein 30, mitochondrial.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.794
C50B8.3	Ndufa7	A0A0V0RQ41	A0A0V0S3A6	Putative complex I intermediate-associated protein 30, mitochondrial.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7.	0.776
C50B8.3	T07_12879	A0A0V0RQ41	A0A0V0SBT0	Putative complex I intermediate-associated protein 30, mitochondrial.	Uncharacterized protein.	0.814
C50B8.3	T07_13159	A0A0V0RQ41	A0A0V0RBP5	Putative complex I intermediate-associated protein 30, mitochondrial.	Uncharacterized protein.	0.778
C50B8.3	nduf-6	A0A0V0RQ41	A0A0V0RNY3	Putative complex I intermediate-associated protein 30, mitochondrial.	Putative NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial.	0.848
COX4I1	COX5B	A0A0V0RG51	A0A0V0SAR8	Mitochondrial cytochrome c oxidase subunit.	Cytochrome c oxidase subunit 5B, mitochondrial.	0.999
COX4I1	CYC1	A0A0V0RG51	A0A0V0RZH8	Mitochondrial cytochrome c oxidase subunit.	Cytochrome c1, heme protein, mitochondrial.	0.999
COX4I1	Cox5b	A0A0V0RG51	A0A0V0RNY6	Mitochondrial cytochrome c oxidase subunit.	Cytochrome c oxidase subunit 5B, mitochondrial.	0.998
COX4I1	F42A8.1	A0A0V0RG51	A0A0V0RMH2	Mitochondrial cytochrome c oxidase subunit.	Uncharacterized protein.	0.717
COX4I1	F42A8.1-2	A0A0V0RG51	A0A0V0SC76	Mitochondrial cytochrome c oxidase subunit.	Uncharacterized protein.	0.717
COX4I1	ND42	A0A0V0RG51	A0A0V0SFL0	Mitochondrial cytochrome c oxidase subunit.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial.	0.990
COX4I1	NDUFA13	A0A0V0RG51	A0A0V0S230	Mitochondrial cytochrome c oxidase subunit.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13.	0.994