STRINGSTRING
SFP45518.1 SFP45518.1 SFP51791.1 SFP51791.1 SFP55149.1 SFP55149.1 xerC xerC SFP62541.1 SFP62541.1 SFP60066.1 SFP60066.1 xerC-2 xerC-2 SFP79065.1 SFP79065.1 SFP99998.1 SFP99998.1 SFQ00210.1 SFQ00210.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SFP45518.1Integrase/recombinase XerD. (192 aa)
SFP51791.1Integrase; Belongs to the 'phage' integrase family. (406 aa)
SFP55149.1Phage integrase family protein; Belongs to the 'phage' integrase family. (565 aa)
xerCIntegrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (301 aa)
SFP62541.1Integrase; Belongs to the 'phage' integrase family. (433 aa)
SFP60066.1DNA topoisomerase-1. (360 aa)
xerC-2Integrase/recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (299 aa)
SFP79065.1DNA topoisomerase-1. (337 aa)
SFP99998.1Site-specific recombinase XerD; Belongs to the 'phage' integrase family. (354 aa)
SFQ00210.1Phage integrase family protein. (210 aa)
Your Current Organism:
Sphingomonas rubra
NCBI taxonomy Id: 634430
Other names: CGMCC 1.9113, JCM 16230, S. rubra, Sphingomonas rubra Huo et al. 2011, Sphingomonas sp. BH3, strain BH3
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