Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHF71895.1 | SHF84652.1 | SAMN05216361_0175 | SAMN05216361_0614 | Monoamine oxidase. | Glyoxylate/hydroxypyruvate reductase A. | 0.810 |
| SHF71895.1 | SHG11443.1 | SAMN05216361_0175 | SAMN05216361_1328 | Monoamine oxidase. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.752 |
| SHF71895.1 | SHG71606.1 | SAMN05216361_0175 | SAMN05216361_2883 | Monoamine oxidase. | Glycine/D-amino acid oxidase. | 0.566 |
| SHF71895.1 | tdh | SAMN05216361_0175 | SAMN05216361_3062 | Monoamine oxidase. | Threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.591 |
| SHF71895.1 | trpA | SAMN05216361_0175 | SAMN05216361_2343 | Monoamine oxidase. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.577 |
| SHF76206.1 | SHG11648.1 | SAMN05216361_0316 | SAMN05216361_1335 | Cystathionine beta-lyase/cystathionine gamma-synthase. | Dihydrolipoamide dehydrogenase. | 0.500 |
| SHF76206.1 | SHG18630.1 | SAMN05216361_0316 | SAMN05216361_1590 | Cystathionine beta-lyase/cystathionine gamma-synthase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.638 |
| SHF76206.1 | SHG59687.1 | SAMN05216361_0316 | SAMN05216361_2513 | Cystathionine beta-lyase/cystathionine gamma-synthase. | Phosphoserine phosphatase. | 0.498 |
| SHF76206.1 | SHG67676.1 | SAMN05216361_0316 | SAMN05216361_2763 | Cystathionine beta-lyase/cystathionine gamma-synthase. | Threonine synthase. | 0.541 |
| SHF76206.1 | SHG67741.1 | SAMN05216361_0316 | SAMN05216361_2765 | Cystathionine beta-lyase/cystathionine gamma-synthase. | Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.950 |
| SHF76206.1 | SHH03259.1 | SAMN05216361_0316 | SAMN05216361_3529 | Cystathionine beta-lyase/cystathionine gamma-synthase. | L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.583 |
| SHF76206.1 | SHH29758.1 | SAMN05216361_0316 | SAMN05216361_4237 | Cystathionine beta-lyase/cystathionine gamma-synthase. | Threonine dehydratase. | 0.660 |
| SHF76206.1 | gcvP | SAMN05216361_0316 | SAMN05216361_1312 | Cystathionine beta-lyase/cystathionine gamma-synthase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.774 |
| SHF76206.1 | glyA | SAMN05216361_0316 | SAMN05216361_2503 | Cystathionine beta-lyase/cystathionine gamma-synthase. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.482 |
| SHF76206.1 | ilvA | SAMN05216361_0316 | SAMN05216361_0837 | Cystathionine beta-lyase/cystathionine gamma-synthase. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.507 |
| SHF76206.1 | thrB | SAMN05216361_0316 | SAMN05216361_2764 | Cystathionine beta-lyase/cystathionine gamma-synthase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.631 |
| SHF76206.1 | trpA | SAMN05216361_0316 | SAMN05216361_2343 | Cystathionine beta-lyase/cystathionine gamma-synthase. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.449 |
| SHF76206.1 | trpB | SAMN05216361_0316 | SAMN05216361_2342 | Cystathionine beta-lyase/cystathionine gamma-synthase. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.446 |
| SHF84652.1 | SHF71895.1 | SAMN05216361_0614 | SAMN05216361_0175 | Glyoxylate/hydroxypyruvate reductase A. | Monoamine oxidase. | 0.810 |
| SHF84652.1 | SHF85263.1 | SAMN05216361_0614 | SAMN05216361_0635 | Glyoxylate/hydroxypyruvate reductase A. | Glycine/D-amino acid oxidase. | 0.554 |
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