STRINGSTRING
SHH39387.1 SHH39387.1 SHF78199.1 SHF78199.1 asd asd SHG09896.1 SHG09896.1 SHG18630.1 SHG18630.1 asd-2 asd-2 dapB dapB SHG64035.1 SHG64035.1 SHG64064.1 SHG64064.1 SHG67741.1 SHG67741.1 dapA dapA cysD cysD cysN cysN
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
SHH39387.1DNA transposition protein, AAA+ family ATPase. (343 aa)
SHF78199.1MSHA biogenesis protein MshM. (307 aa)
asdAspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (373 aa)
SHG09896.1Putative secretion ATPase, PEP-CTERM locus subfamily. (361 aa)
SHG18630.1Aspartate kinase; Belongs to the aspartokinase family. (449 aa)
asd-2Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (338 aa)
dapB4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (267 aa)
SHG64035.1General secretion pathway protein B. (350 aa)
SHG64064.1General secretion pathway protein A. (301 aa)
SHG67741.1Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family. (821 aa)
dapA4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (294 aa)
cysDSulfate adenylyltransferase subunit 2. (304 aa)
cysNSulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (471 aa)
Your Current Organism:
Marisediminitalea aggregata
NCBI taxonomy Id: 634436
Other names: Aestuariibacter aggregatus, Aestuariibacter aggregatus Wang et al. 2010, Alteromonas sp. WH169, CGMCC 1.8995, LMG 25283, LMG:25283, M. aggregata, Marisediminitalea aggregata (Wang et al. 2010) Zhang et al., strain WH169
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