Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BAH98252.1 | BAH99613.1 | APA01_00950 | APA01_14730 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Pyruvate ferredoxin/flavodoxin oxidoreductase. | 0.973 |
| BAH98252.1 | BAH99614.1 | APA01_00950 | APA01_14740 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Glutamate synthase [NADPH] small subunit. | 0.621 |
| BAH98261.1 | BAH98404.1 | APA01_01040 | APA01_02520 | Dihydroorotase. | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.957 |
| BAH98261.1 | BAH98908.1 | APA01_01040 | APA01_07600 | Dihydroorotase. | Dihydroorotase. | 0.926 |
| BAH98261.1 | BAH99612.1 | APA01_01040 | APA01_14720 | Dihydroorotase. | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate. | 0.951 |
| BAH98261.1 | BAI00276.1 | APA01_01040 | APA01_21610 | Dihydroorotase. | Dihydroorotate dehydrogenase. | 0.640 |
| BAH98261.1 | carA | APA01_01040 | APA01_09880 | Dihydroorotase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.976 |
| BAH98261.1 | carB | APA01_01040 | APA01_09870 | Dihydroorotase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.978 |
| BAH98261.1 | guaA | APA01_01040 | APA01_22710 | Dihydroorotase. | Glutamine amidotransferase; Catalyzes the synthesis of GMP from XMP. | 0.402 |
| BAH98261.1 | pyrB | APA01_01040 | APA01_07610 | Dihydroorotase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
| BAH98261.1 | pyrE | APA01_01040 | APA01_10650 | Dihydroorotase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.737 |
| BAH98261.1 | pyrF | APA01_01040 | APA01_21740 | Dihydroorotase. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.737 |
| BAH98376.1 | BAH99613.1 | APA01_02240 | APA01_14730 | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Pyruvate ferredoxin/flavodoxin oxidoreductase. | 0.478 |
| BAH98376.1 | BAI00276.1 | APA01_02240 | APA01_21610 | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Dihydroorotate dehydrogenase. | 0.400 |
| BAH98376.1 | BAI00557.1 | APA01_02240 | APA01_24490 | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.996 |
| BAH98376.1 | folD | APA01_02240 | APA01_02250 | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Methylene-tetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.985 |
| BAH98376.1 | glyA | APA01_02240 | APA01_19360 | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Serine hydroxymethyl transferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.948 |
| BAH98376.1 | metK | APA01_02240 | APA01_02930 | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | S-adenosylmethionine (SAM) synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.772 |
| BAH98376.1 | thyX | APA01_02240 | APA01_24920 | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Thymidylate synthase (FAD) ThyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.908 |
| BAH98404.1 | BAH98261.1 | APA01_02520 | APA01_01040 | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Dihydroorotase. | 0.957 |
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