(19 nodes) Cobalamin-binding domain superfamily network (Thermincola potens)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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experimentally determined

Predicted Interactions

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Your Input:
	ADG80923.1	Methionine synthase; KEGG: mta:Moth_1208 5-methyltetrahydrofolate--homocysteine S-methyltransferase; PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein. (211 aa)
	ADG80948.1	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: dth:DICTH_0565 trimethylamine corrinoid protein 2. (211 aa)
	ADG80954.1	Methionine synthase; KEGG: dth:DICTH_0565 trimethylamine corrinoid protein 2; PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein. (208 aa)
	ADG81034.1	KEGG: mch:Mchl_5697 methyltransferase MtaA/CmuA family; TIGRFAM: methyltransferase MtaA/CmuA family; PFAM: Methionine synthase B12-binding module cap domain protein; Uroporphyrinogen decarboxylase (URO-D); cobalamin B12-binding domain protein; Belongs to the uroporphyrinogen decarboxylase family. (611 aa)
	ADG81126.1	KEGG: kcr:Kcr_0016 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB. (611 aa)
	ADG81127.1	Radical SAM domain protein; KEGG: tvo:TVN1378 Fe-S oxidoreductase; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB. (603 aa)
	ADG81849.1	KEGG: cbb:CLD_3057 dimethylamine corrinoid protein; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein. (220 aa)
	ADG81850.1	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: cbi:CLJ_B1597 dimethylamine corrinoid protein. (240 aa)
	ADG81852.1	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: rci:RCIX1973 methanol:cobalamin methyltransferase, subunit C. (250 aa)
	ADG81854.1	Methyltransferase cognate corrinoid protein; KEGG: rci:RCIX1973 methanol:cobalamin methyltransferase, subunit C; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein. (249 aa)
	ADG81991.1	KEGG: geo:Geob_0066 radical SAM domain protein; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. (1005 aa)
	ADG83059.1	KEGG: geo:Geob_0066 radical SAM domain protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB. (482 aa)
	ADG83173.1	KEGG: tle:Tlet_1717 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB. (445 aa)
	ADG83456.1	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: amt:Amet_2086 cobalamin B12-binding domain-containing protein. (212 aa)
	ADG83459.1	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: amt:Amet_2097 cobalamin B12-binding domain-containing protein. (225 aa)
	ADG83464.1	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: dsy:DSY2721 hypothetical protein. (212 aa)
	ADG83689.1	KEGG: geo:Geob_0066 radical SAM domain protein; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. (490 aa)
	ADG83774.1	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: dhd:Dhaf_4325 methyltransferase cognate corrinoid protein. (214 aa)
	ADG83780.1	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: dth:DICTH_0565 trimethylamine corrinoid protein 2. (220 aa)

Your Current Organism:

Thermincola potens

NCBI taxonomy Id: 635013
Other names: T. potens JR, Thermincola potens JR, Thermincola potens str. JR, Thermincola potens strain JR, Thermincola sp. JR

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADG81126.1	ADG81127.1	TherJR_0238	TherJR_0239	KEGG: kcr:Kcr_0016 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB.	Radical SAM domain protein; KEGG: tvo:TVN1378 Fe-S oxidoreductase; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB.	0.471
ADG81126.1	ADG83689.1	TherJR_0238	TherJR_2857	KEGG: kcr:Kcr_0016 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB.	KEGG: geo:Geob_0066 radical SAM domain protein; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.	0.642
ADG81127.1	ADG81126.1	TherJR_0239	TherJR_0238	Radical SAM domain protein; KEGG: tvo:TVN1378 Fe-S oxidoreductase; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB.	KEGG: kcr:Kcr_0016 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB.	0.471
ADG81127.1	ADG83173.1	TherJR_0239	TherJR_2332	Radical SAM domain protein; KEGG: tvo:TVN1378 Fe-S oxidoreductase; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB.	KEGG: tle:Tlet_1717 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB.	0.480
ADG81849.1	ADG81850.1	TherJR_0983	TherJR_0984	KEGG: cbb:CLD_3057 dimethylamine corrinoid protein; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein.	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: cbi:CLJ_B1597 dimethylamine corrinoid protein.	0.947
ADG81849.1	ADG81852.1	TherJR_0983	TherJR_0986	KEGG: cbb:CLD_3057 dimethylamine corrinoid protein; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein.	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: rci:RCIX1973 methanol:cobalamin methyltransferase, subunit C.	0.815
ADG81849.1	ADG81854.1	TherJR_0983	TherJR_0988	KEGG: cbb:CLD_3057 dimethylamine corrinoid protein; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein.	Methyltransferase cognate corrinoid protein; KEGG: rci:RCIX1973 methanol:cobalamin methyltransferase, subunit C; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein.	0.710
ADG81849.1	ADG83774.1	TherJR_0983	TherJR_2944	KEGG: cbb:CLD_3057 dimethylamine corrinoid protein; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein.	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: dhd:Dhaf_4325 methyltransferase cognate corrinoid protein.	0.914
ADG81850.1	ADG81849.1	TherJR_0984	TherJR_0983	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: cbi:CLJ_B1597 dimethylamine corrinoid protein.	KEGG: cbb:CLD_3057 dimethylamine corrinoid protein; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein.	0.947
ADG81850.1	ADG81852.1	TherJR_0984	TherJR_0986	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: cbi:CLJ_B1597 dimethylamine corrinoid protein.	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: rci:RCIX1973 methanol:cobalamin methyltransferase, subunit C.	0.868
ADG81850.1	ADG81854.1	TherJR_0984	TherJR_0988	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: cbi:CLJ_B1597 dimethylamine corrinoid protein.	Methyltransferase cognate corrinoid protein; KEGG: rci:RCIX1973 methanol:cobalamin methyltransferase, subunit C; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein.	0.735
ADG81850.1	ADG83774.1	TherJR_0984	TherJR_2944	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: cbi:CLJ_B1597 dimethylamine corrinoid protein.	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: dhd:Dhaf_4325 methyltransferase cognate corrinoid protein.	0.912
ADG81852.1	ADG81849.1	TherJR_0986	TherJR_0983	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: rci:RCIX1973 methanol:cobalamin methyltransferase, subunit C.	KEGG: cbb:CLD_3057 dimethylamine corrinoid protein; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein.	0.815
ADG81852.1	ADG81850.1	TherJR_0986	TherJR_0984	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: rci:RCIX1973 methanol:cobalamin methyltransferase, subunit C.	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: cbi:CLJ_B1597 dimethylamine corrinoid protein.	0.868
ADG81852.1	ADG81854.1	TherJR_0986	TherJR_0988	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: rci:RCIX1973 methanol:cobalamin methyltransferase, subunit C.	Methyltransferase cognate corrinoid protein; KEGG: rci:RCIX1973 methanol:cobalamin methyltransferase, subunit C; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein.	0.903
ADG81852.1	ADG83774.1	TherJR_0986	TherJR_2944	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: rci:RCIX1973 methanol:cobalamin methyltransferase, subunit C.	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: dhd:Dhaf_4325 methyltransferase cognate corrinoid protein.	0.730
ADG81854.1	ADG81849.1	TherJR_0988	TherJR_0983	Methyltransferase cognate corrinoid protein; KEGG: rci:RCIX1973 methanol:cobalamin methyltransferase, subunit C; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein.	KEGG: cbb:CLD_3057 dimethylamine corrinoid protein; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein.	0.710
ADG81854.1	ADG81850.1	TherJR_0988	TherJR_0984	Methyltransferase cognate corrinoid protein; KEGG: rci:RCIX1973 methanol:cobalamin methyltransferase, subunit C; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein.	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: cbi:CLJ_B1597 dimethylamine corrinoid protein.	0.735
ADG81854.1	ADG81852.1	TherJR_0988	TherJR_0986	Methyltransferase cognate corrinoid protein; KEGG: rci:RCIX1973 methanol:cobalamin methyltransferase, subunit C; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein.	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: rci:RCIX1973 methanol:cobalamin methyltransferase, subunit C.	0.903
ADG81854.1	ADG83774.1	TherJR_0988	TherJR_2944	Methyltransferase cognate corrinoid protein; KEGG: rci:RCIX1973 methanol:cobalamin methyltransferase, subunit C; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein.	PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: dhd:Dhaf_4325 methyltransferase cognate corrinoid protein.	0.723