STRINGSTRING
ACC81576.1 ACC81576.1 ACC84040.1 ACC84040.1 ACC81559.1 ACC81559.1 rimM rimM ACC83758.1 ACC83758.1 ACC83759.1 ACC83759.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACC81576.1PFAM: PRC-barrel domain protein; KEGG: ana:alr5332 unknown protein. (212 aa)
ACC84040.1PFAM: PRC-barrel domain protein; KEGG: ava:Ava_4688 PRC-barrel. (331 aa)
ACC81559.1PFAM: PRC-barrel domain protein; KEGG: ana:all5315 hypothetical protein. (294 aa)
rimM16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. (235 aa)
ACC83758.1PFAM: PRC-barrel domain protein; KEGG: ava:Ava_1656 hypothetical protein. (317 aa)
ACC83759.1PFAM: PRC-barrel domain protein; KEGG: ava:Ava_1657 hypothetical protein. (298 aa)
Your Current Organism:
Nostoc punctiforme
NCBI taxonomy Id: 63737
Other names: N. punctiforme PCC 73102, Nostoc punctiforme ATCC 29133, Nostoc punctiforme PCC 73102, Nostoc sp. (strain ATCC 29133 / PCC 73102), Nostoc sp. ATCC 29133, Nostoc sp. PCC 73102
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