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SVI_0004 SVI_0004 coxN coxN SVI_0006 SVI_0006 SVI_0007 SVI_0007 SVI_0188 SVI_0188 SVI_0190 SVI_0190 SVI_0191 SVI_0191 cyoE-2 cyoE-2 cyoD cyoD cyoC cyoC cyoB cyoB cyoA cyoA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SVI_0004Cytochrome c oxidase, subunit II. (492 aa)
coxNAlternative cytochrome c oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family. (604 aa)
SVI_0006Cytochrome c oxidase subunit III. (231 aa)
SVI_0007Cytochrome c oxidase subunit III. (230 aa)
SVI_0188Cytochrome c oxidase subunit III. (291 aa)
SVI_0190Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (531 aa)
SVI_0191Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (373 aa)
cyoE-2Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (299 aa)
cyoDCytochrome o ubiquinol oxidase, subunit IV. (111 aa)
cyoCCytochrome o ubiquinol oxidase, subunit III. (207 aa)
cyoBCytochrome o ubiquinol oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family. (661 aa)
cyoACytochrome o ubiquinol oxidase, subunit II. (300 aa)
Your Current Organism:
Shewanella violacea
NCBI taxonomy Id: 637905
Other names: S. violacea DSS12, Shewanella violacea DSS12, Shewanella violacea JCM 10179, Shewanella violacea str. DSS12, Shewanella violacea strain DSS12
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